RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 NBPF20Q3BBV1 942 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 TMEM240Q5SV17 173 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 NFRKBQ6P4R8 1299 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 TMTC2Q8N394 836 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 RRP36Q96EU6 259 aaKnown RBP14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 GUCD1Q96NT3 240 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 LZTS2Q9BRK4 669 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 PDCD2LQ9BRP1 358 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 SPZ1Q9BXG8 430 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 MTIF3Q9H2K0 278 aaKnown RBP14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 IL23AQ9NPF7 189 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 SEC63Q9UGP8 760 aaKnown RBP14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 UMODL1Q5DID0 1318 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 CDC45O75419 566 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 MMP3P08254 477 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 CALM1P0DP23 149 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 CALM2P0DP24 149 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 CALM3P0DP25 149 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 CYP2C9P11712 490 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 CCND2P30279 289 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 GNAQP50148 359 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 PGM5Q15124 567 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 NECTIN1Q15223 517 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 TMEM132AQ24JP5 1023 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 ZNF365Q70YC5 407 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 C16orf59Q7L2K0 433 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 FCHSD1Q86WN1 690 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 WNT8AQ9H1J5 351 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 NOD1Q9Y239 953 aa14.29□□□□□ -0.12
CTDNEP1-205ENST00000570828 TMEM265A0A087WTH1 108 aa14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 CASTP20810 708 aaKnown RBP14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 LIFRP42702 1097 aa14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 PTPN11Q06124 597 aaPredicted RBP14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 LAMC2Q13753 1193 aa14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 DGKDQ16760 1214 aa14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 KCNV1Q6PIU1 500 aa14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 SLC17A8Q8NDX2 589 aa14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 EMID1Q96A84 441 aaPredicted RBP14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 DDX41Q9UJV9 622 aaKnown RBP14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 SLC12A7Q9Y666 1083 aa14.28□□□□□ -0.12
CTDNEP1-205ENST00000570828 A0A0C4DFX4 3053 aa14.27□□□□□ -0.12
CTDNEP1-205ENST00000570828 PLEKHA8P1O95397 391 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 RXRAP19793 462 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 DNAJB2P25686 324 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 SMARCA1P28370 1054 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 GNPTABQ3T906 1256 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 VSIG10LQ86VR7 867 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 DHX37Q8IY37 1157 aaKnown RBP14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 IL31RAQ8NI17 732 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 PPTC7Q8NI37 304 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 PPP1R13LQ8WUF5 828 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 CUL5Q93034 780 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 CCDC136Q96JN2 1154 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 LRRC2Q9BYS8 371 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 SEMA6BQ9H3T3 888 aa14.27□□□□□ -0.13
CTDNEP1-205ENST00000570828 FGBP02675 491 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 PFKMP08237 780 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 COL9A3Q14050 684 aaPredicted RBP14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 SYNE3Q6ZMZ3 975 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 MICU3Q86XE3 530 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 RAB11FIP4Q86YS3 637 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 RPUSD2Q8IZ73 545 aaKnown RBP14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 FBXO22Q8NEZ5 403 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 SMARCC2Q8TAQ2 1214 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 HERVK_113Q902F9 699 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 TIFAQ96CG3 184 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 SCLYQ96I15 445 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 CDX2Q99626 313 aaPredicted RBP14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 TTYH1Q9H313 450 aaPredicted RBP14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 CDH23Q9H251 3354 aa14.26□□□□□ -0.13
CTDNEP1-205ENST00000570828 FRMPD4Q14CM0 1322 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 RGS20O76081 388 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 GGPS1O95749 300 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 NUDT7P0C024 238 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 ZNF286BP0CG31 522 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 TGFB3P10600 412 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 UBA1P22314 1058 aaKnown RBP14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 BFSP2Q13515 415 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 OTOP2Q7RTS6 562 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 SGMS1Q86VZ5 419 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 CMTR1Q8N1G2 835 aaKnown RBP14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 SRBD1Q8N5C6 995 aaKnown RBP14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 CCDC155Q8N6L0 562 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 RETREG2Q8NC44 543 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 KAT2BQ92831 832 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 SPATA33Q96N06 139 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 NEK1Q96PY6 1258 aa14.25□□□□□ -0.13
CTDNEP1-205ENST00000570828 SCN10AQ9Y5Y9 1956 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 ZBBXA8MT70 800 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 SORBS3O60504 671 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 STAM2O75886 525 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 F2P00734 622 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 RFC2P35250 354 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 KRT32Q14532 448 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 MFSD10Q14728 455 aa14.24□□□□□ -0.13
CTDNEP1-205ENST00000570828 RAB30Q15771 203 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms