RNA–Protein interactions for RNA: ENST00000569601.5

RPUSD1-210, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-210ENST00000569601 LIFRP42702 1097 aa27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 RAB11FIP4Q86YS3 637 aa27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 CMTR1Q8N1G2 835 aaKnown RBP27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 SRBD1Q8N5C6 995 aaKnown RBP27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 SPATA33Q96N06 139 aa27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 LZTS2Q9BRK4 669 aa27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 NKX2-4Q9H2Z4 354 aa27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 HDAC6Q9UBN7 1215 aa27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 YBX2Q9Y2T7 364 aaKnown RBP27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 FRMPD4Q14CM0 1322 aa27.09■■□□□ 1.93
RPUSD1-210ENST00000569601 F2P00734 622 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 TGFB3P10600 412 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 HOXD8P13378 290 aaPredicted RBP27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 GNAQP50148 359 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 MRPS9P82933 396 aaKnown RBP27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 MFSD10Q14728 455 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 KIAA0753Q2KHM9 967 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 HSDL1Q3SXM5 330 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 C7orf31Q8N865 590 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 KATNAL1Q9BW62 490 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 SEC63Q9UGP8 760 aaKnown RBP27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 GTF2IRD1Q9UHL9 959 aa27.08■■□□□ 1.93
RPUSD1-210ENST00000569601 HAS3O00219 553 aa27.07■■□□□ 1.92
RPUSD1-210ENST00000569601 RABGGTBP53611 331 aa27.07■■□□□ 1.92
RPUSD1-210ENST00000569601 USP17L6PQ6QN14 398 aa27.07■■□□□ 1.92
RPUSD1-210ENST00000569601 PPFIA4O75335 1185 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 CALM1P0DP23 149 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 CALM2P0DP24 149 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 CALM3P0DP25 149 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 CCDC155Q8N6L0 562 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 SMARCC2Q8TAQ2 1214 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 CAGE1Q8TC20 777 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 DHX38Q92620 1227 aaKnown RBP27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 PRDM12Q9H4Q4 367 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 BCAS3Q9H6U6 928 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 MLXIPQ9HAP2 919 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 SLC12A7Q9Y666 1083 aa27.06■■□□□ 1.92
RPUSD1-210ENST00000569601 ACTN1P12814 892 aa27.05■■□□□ 1.92
RPUSD1-210ENST00000569601 ATP2A2P16615 1042 aaKnown RBP27.05■■□□□ 1.92
RPUSD1-210ENST00000569601 AFAP1L1Q8TED9 768 aa27.05■■□□□ 1.92
RPUSD1-210ENST00000569601 CUL5Q93034 780 aa27.05■■□□□ 1.92
RPUSD1-210ENST00000569601 FTOQ9C0B1 505 aaKnown RBP eCLIP27.05■■□□□ 1.92
RPUSD1-210ENST00000569601 RTEL1Q9NZ71 1219 aa27.05■■□□□ 1.92
RPUSD1-210ENST00000569601 MEIS2O14770 477 aa27.04■■□□□ 1.92
RPUSD1-210ENST00000569601 MYOGP15173 224 aa27.04■■□□□ 1.92
RPUSD1-210ENST00000569601 GNPTABQ3T906 1256 aa27.04■■□□□ 1.92
RPUSD1-210ENST00000569601 RNF20Q5VTR2 975 aa27.04■■□□□ 1.92
RPUSD1-210ENST00000569601 INPP4AQ96PE3 977 aaPredicted RBP27.04■■□□□ 1.92
RPUSD1-210ENST00000569601 SLC28A3Q9HAS3 691 aa27.04■■□□□ 1.92
RPUSD1-210ENST00000569601 PTPRSQ13332 1948 aa27.04■■□□□ 1.92
RPUSD1-210ENST00000569601 hCG_1642624A0A1W2PR95 340 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 PIK3CDO00329 1044 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 STAM2O75886 525 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 ICAM3P32942 547 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 SEMA3FQ13275 785 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 SGMS1Q86VZ5 419 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 CCDC82Q8N4S0 544 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 FANCBQ8NB91 859 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 GAS2L1Q99501 681 aaPredicted RBP27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 CHD7Q9P2D1 2997 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 PCDHA11Q9Y5I1 949 aa27.03■■□□□ 1.92
RPUSD1-210ENST00000569601 SPATA31C2B4DYI2 1134 aa27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 SELPP16109 830 aa27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 ZNF200P98182 395 aaPredicted RBP27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 RBL2Q08999 1139 aa27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 GPNMBQ14956 572 aa27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 TMTC3Q6ZXV5 915 aa27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 MICU3Q86XE3 530 aa27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 NEK1Q96PY6 1258 aa27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 C16orf70Q9BSU1 422 aa27.02■■□□□ 1.92
RPUSD1-210ENST00000569601 CDC45O75419 566 aa27.01■■□□□ 1.91
RPUSD1-210ENST00000569601 CKBP12277 381 aa27.01■■□□□ 1.91
RPUSD1-210ENST00000569601 HIC1Q14526 733 aa27.01■■□□□ 1.91
RPUSD1-210ENST00000569601 PCNX4Q63HM2 1172 aa27.01■■□□□ 1.91
RPUSD1-210ENST00000569601 LRRC8DQ7L1W4 858 aa27.01■■□□□ 1.91
RPUSD1-210ENST00000569601 USP38Q8NB14 1042 aa27.01■■□□□ 1.91
RPUSD1-210ENST00000569601 FIBPO43427 364 aa27■■□□□ 1.91
RPUSD1-210ENST00000569601 PTK7Q13308 1070 aa27■■□□□ 1.91
RPUSD1-210ENST00000569601 NEDD9Q14511 834 aa27■■□□□ 1.91
RPUSD1-210ENST00000569601 CYFIP1Q7L576 1253 aa27■■□□□ 1.91
RPUSD1-210ENST00000569601 RASEFQ8IZ41 740 aa27■■□□□ 1.91
RPUSD1-210ENST00000569601 WNT8BQ93098 351 aa27■■□□□ 1.91
RPUSD1-210ENST00000569601 TCEANC2Q96MN5 208 aa27■■□□□ 1.91
RPUSD1-210ENST00000569601 PSTPIP2Q9H939 334 aa27■■□□□ 1.91
RPUSD1-210ENST00000569601 LGALS2P05162 132 aa26.99■■□□□ 1.91
RPUSD1-210ENST00000569601 EXOSC10Q01780 885 aaKnown RBP26.99■■□□□ 1.91
RPUSD1-210ENST00000569601 TRIM71Q2Q1W2 868 aaKnown RBP26.99■■□□□ 1.91
RPUSD1-210ENST00000569601 PPP2R2DQ66LE6 453 aa26.99■■□□□ 1.91
RPUSD1-210ENST00000569601 SLC9A7Q96T83 725 aa26.99■■□□□ 1.91
RPUSD1-210ENST00000569601 H3BRB1 525 aa26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 NOP56O00567 594 aaKnown RBP26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 ADGRE1Q14246 886 aa26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 ADCK5Q3MIX3 580 aa26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 XRRA1Q6P2D8 792 aa26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 APOA5Q6Q788 366 aa26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 METTL7BQ6UX53 244 aa26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 SYNE3Q6ZMZ3 975 aa26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 COL25A1Q9BXS0 654 aaPredicted RBP26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 TUT1Q9H6E5 874 aaKnown RBP26.98■■□□□ 1.91
RPUSD1-210ENST00000569601 KAT6AQ92794 2004 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms