RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 SYT1P21579 422 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 CYP3A7P24462 503 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 TRAPPC10P48553 1259 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 LAMC2Q13753 1193 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 LETM2Q2VYF4 491 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 PRR16Q569H4 304 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 LHX8Q68G74 356 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 TLK2Q86UE8 772 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 PLA2G4DQ86XP0 818 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 OR6J1Q8NGC5 347 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 ZFP91Q96JP5 570 aaPredicted RBP10.36□□□□□ -0.75
CHD9-219ENST00000569225 SENP7Q9BQF6 1050 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 CRISPLD2Q9H0B8 497 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 KCNH7Q9NS40 1196 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 GNEQ9Y223 722 aaKnown RBP10.36□□□□□ -0.75
CHD9-219ENST00000569225 HTTP42858 3142 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.35□□□□□ -0.75
CHD9-219ENST00000569225 FAM86B1E9PN63 330 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 DYNC1LI2O43237 492 aaPredicted RBP10.35□□□□□ -0.75
CHD9-219ENST00000569225 ZEB2O60315 1214 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 FAM86B2P0C5J1 330 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 UBA1P22314 1058 aaKnown RBP10.35□□□□□ -0.75
CHD9-219ENST00000569225 CPT1AP50416 773 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 GJA9P57773 515 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 LY6KQ17RY6 165 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 Q4G0T1 1027 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 ANO1Q5XXA6 986 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 PPP4R3AQ6IN85 833 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 DHX37Q8IY37 1157 aaKnown RBP10.35□□□□□ -0.75
CHD9-219ENST00000569225 ANKLE1Q8NAG6 615 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 SPRYD3Q8NCJ5 442 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 EMID1Q96A84 441 aaPredicted RBP10.35□□□□□ -0.75
CHD9-219ENST00000569225 SDF4Q9BRK5 362 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 UPF3AQ9H1J1 476 aaKnown RBP10.35□□□□□ -0.75
CHD9-219ENST00000569225 MLXIPQ9HAP2 919 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 DDX25Q9UHL0 483 aaKnown RBP10.35□□□□□ -0.75
CHD9-219ENST00000569225 TCEAL9Q9UHQ7 104 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 OGDHLQ9ULD0 1010 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 PLXNA1Q9UIW2 1896 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 SYNRGQ9UMZ2 1314 aa10.35□□□□□ -0.75
CHD9-219ENST00000569225 KBTBD13C9JR72 458 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 STX6O43752 255 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 CCNT1O60563 726 aaKnown RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 ARIH2O95376 493 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 GGPS1O95749 300 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 MYCNP04198 464 aaPredicted RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 C6orf222P0C671 652 aaPredicted RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 ORC2Q13416 577 aaPredicted RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 CELF3Q5SZQ8 465 aaKnown RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 BRAPQ7Z569 592 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 PCSK9Q8NBP7 692 aaKnown RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 CYP2W1Q8TAV3 490 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 LENG1Q96BZ8 264 aaPredicted RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 ZNF577Q9BSK1 485 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 AGO4Q9HCK5 861 aaKnown RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 TBC1D22BQ9NU19 505 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 ZNFX1Q9P2E3 1918 aaKnown RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 LCTP09848 1927 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 IGLV3-22A0A075B6J6 115 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 KIF28PB7ZC32 967 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 DNM1LO00429 736 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 NOP56O00567 594 aaKnown RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 ADCY6O43306 1168 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 MARCH6O60337 910 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 TDP2O95551 362 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 PGK1P00558 417 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 CST5P28325 142 aaPredicted RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 NKX3-2P78367 333 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 ARHGAP1Q07960 439 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 SEMA3FQ13275 785 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 FSCN1Q16658 493 aaKnown RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 RILPL1Q5EBL4 403 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 EARS2Q5JPH6 523 aaKnown RBP10.34□□□□□ -0.75
CHD9-219ENST00000569225 METTL7BQ6UX53 244 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 SPATA33Q96N06 139 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 MBOAT7Q96N66 472 aa10.34□□□□□ -0.75
CHD9-219ENST00000569225 NFASCO94856 1347 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 FAM205CA6NFA0 338 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 IPO5O00410 1097 aaKnown RBP10.33□□□□□ -0.76
CHD9-219ENST00000569225 KPNA6O60684 536 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 ADAMTS4O75173 837 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 BAG4O95429 457 aaKnown RBP10.33□□□□□ -0.76
CHD9-219ENST00000569225 ARP10275 920 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 KCNA2P16389 499 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 LRRC41Q15345 812 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 GNASQ5JWF2 1037 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 GJC2Q5T442 439 aaPredicted RBP10.33□□□□□ -0.76
CHD9-219ENST00000569225 MYSM1Q5VVJ2 828 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 PPTC7Q8NI37 304 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 COPS5Q92905 334 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 TSEN34Q9BSV6 310 aaKnown RBP10.33□□□□□ -0.76
CHD9-219ENST00000569225 ZSCAN16Q9H4T2 348 aaPredicted RBP10.33□□□□□ -0.76
CHD9-219ENST00000569225 JPH1Q9HDC5 661 aaPredicted RBP10.33□□□□□ -0.76
CHD9-219ENST00000569225 PKD2L1Q9P0L9 805 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 MTMR6Q9Y217 621 aa10.33□□□□□ -0.76
CHD9-219ENST00000569225 LRRC37A2A6NM11 1700 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 MOXD2PA6NHM9 499 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 A6NJR5 290 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 TBX3O15119 743 aa10.32□□□□□ -0.76
CHD9-219ENST00000569225 NEMFO60524 1076 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms