RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 HSDL1Q3SXM5 330 aa17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 C7orf31Q8N865 590 aa17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 AFAP1L1Q8TED9 768 aa17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 DHX38Q92620 1227 aaKnown RBP17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 GPKOWQ92917 476 aaPredicted RBP eCLIP17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 RRP36Q96EU6 259 aaKnown RBP17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 ZFP91Q96JP5 570 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 SPATA33Q96N06 139 aa17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 CUL9Q8IWT3 2517 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 SORBS3O60504 671 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 PPFIA4O75335 1185 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 SP2Q02086 613 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 RBL2Q08999 1139 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 COL9A3Q14050 684 aaPredicted RBP17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 NECTIN1Q15223 517 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 CREB3L3Q68CJ9 461 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 NFXL1Q6ZNB6 911 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 TMTC2Q8N394 836 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 USP38Q8NB14 1042 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 SLC9A7Q96T83 725 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 LZTS2Q9BRK4 669 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 FTOQ9C0B1 505 aaKnown RBP eCLIP17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 ANO2Q9NQ90 1003 aa17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 SEC63Q9UGP8 760 aaKnown RBP17.39■□□□□ 0.37
SCAMP2-209ENST00000567638 KAT6AQ92794 2004 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 CCDC69A6NI79 296 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 STAM2O75886 525 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 PLEKHA8P1O95397 391 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 MYOGP15173 224 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 SELPP16109 830 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 LIFRP42702 1097 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 GNAQP50148 359 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 MRPS9P82933 396 aaKnown RBP17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 GNPTABQ3T906 1256 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 BMP2KLQ5H9B9 411 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 PPP2R2DQ66LE6 453 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 LRRC8DQ7L1W4 858 aa17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 INPP4AQ96PE3 977 aaPredicted RBP17.38■□□□□ 0.37
SCAMP2-209ENST00000567638 MICAL3Q7RTP6 2002 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 BAIAP3O94812 1187 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 CALM1P0DP23 149 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 CALM2P0DP24 149 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 CALM3P0DP25 149 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 ICAM3P32942 547 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 PTK7Q13308 1070 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 ADGRE1Q14246 886 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 CENPQQ7L2Z9 268 aaPredicted RBP17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 SRBD1Q8N5C6 995 aaKnown RBP17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 SMARCC2Q8TAQ2 1214 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 PHOSPHO2Q8TCD6 241 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 CUL5Q93034 780 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 C16orf70Q9BSU1 422 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 MLXIPQ9HAP2 919 aa17.37■□□□□ 0.37
SCAMP2-209ENST00000567638 COL4A4P53420 1690 aaPredicted RBP17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 PARNO95453 639 aaKnown RBP17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 CKBP12277 381 aa17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 RXRAP19793 462 aa17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 GPNMBQ14956 572 aa17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 USP17L6PQ6QN14 398 aa17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 SKAP1Q86WV1 359 aa17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 CHD9Q3L8U1 2897 aa17.36■□□□□ 0.37
SCAMP2-209ENST00000567638 SPATA31C2B4DYI2 1134 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 MEIS2O14770 477 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 FIBPO43427 364 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 CA3P07451 260 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 SEMA3FQ13275 785 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 HIC1Q14526 733 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 TRIM71Q2Q1W2 868 aaKnown RBP17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 PCNX4Q63HM2 1172 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 CMTR1Q8N1G2 835 aaKnown RBP17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 WNT8BQ93098 351 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 LRRC2Q9BYS8 371 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 BCAS3Q9H6U6 928 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 RTEL1Q9NZ71 1219 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 SLC12A7Q9Y666 1083 aa17.35■□□□□ 0.37
SCAMP2-209ENST00000567638 A0A0C4DFX4 3053 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 NOP56O00567 594 aaKnown RBP17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 NBNO60934 754 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 CXCL10P02778 98 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 LGALS2P05162 132 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 IGFBP4P22692 258 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 KCNJ6P48051 423 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 ZNF200P98182 395 aaPredicted RBP17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 NEDD9Q14511 834 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 RNF20Q5VTR2 975 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 XRRA1Q6P2D8 792 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 CNKSR3Q6P9H4 555 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 METTL7BQ6UX53 244 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 SGMS1Q86VZ5 419 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 RAB11FIP4Q86YS3 637 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 HERC6Q8IVU3 1022 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 PRUNE2Q8WUY3 3088 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 PPM1EQ8WY54 764 aa17.34■□□□□ 0.37
SCAMP2-209ENST00000567638 SIP14410 1827 aa17.33■□□□□ 0.37
SCAMP2-209ENST00000567638 H3BRB1 525 aa17.33■□□□□ 0.36
SCAMP2-209ENST00000567638 HOXC8P31273 242 aa17.33■□□□□ 0.36
SCAMP2-209ENST00000567638 WDR5P61964 334 aaKnown RBP17.33■□□□□ 0.36
SCAMP2-209ENST00000567638 ZNF618Q5T7W0 954 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms