RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 PCDHA11Q9Y5I1 949 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 TRANK1O15050 2925 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 KAT6AQ92794 2004 aa17.57■□□□□ 0.4
SMPD3-208ENST00000566723 HAS3O00219 553 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 SH2B2O14492 632 aaPredicted RBP17.56■□□□□ 0.4
SMPD3-208ENST00000566723 SLC27A2O14975 620 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 MCM5P33992 734 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 RBL2Q08999 1139 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 KIAA0753Q2KHM9 967 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 HSDL1Q3SXM5 330 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 PPP2R2DQ66LE6 453 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 C7orf31Q8N865 590 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 USP38Q8NB14 1042 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 DHX38Q92620 1227 aaKnown RBP17.56■□□□□ 0.4
SMPD3-208ENST00000566723 RRP36Q96EU6 259 aaKnown RBP17.56■□□□□ 0.4
SMPD3-208ENST00000566723 TMEM87BQ96K49 555 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 SLC9A7Q96T83 725 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 ALG1Q9BT22 464 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 HDAC6Q9UBN7 1215 aa17.56■□□□□ 0.4
SMPD3-208ENST00000566723 TTC28Q96AY4 2481 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 SORBS3O60504 671 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 STAM2O75886 525 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 SMARCA1P28370 1054 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 NFXL1Q6ZNB6 911 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 LRRC8DQ7L1W4 858 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 TMTC2Q8N394 836 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 GPKOWQ92917 476 aaPredicted RBP eCLIP17.55■□□□□ 0.4
SMPD3-208ENST00000566723 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 FTOQ9C0B1 505 aaKnown RBP eCLIP17.55■□□□□ 0.4
SMPD3-208ENST00000566723 SEC63Q9UGP8 760 aaKnown RBP17.55■□□□□ 0.4
SMPD3-208ENST00000566723 REV3LO60673 3130 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 MICAL3Q7RTP6 2002 aa17.55■□□□□ 0.4
SMPD3-208ENST00000566723 CCDC69A6NI79 296 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 PPFIA4O75335 1185 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 BAIAP3O94812 1187 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 PLEKHA8P1O95397 391 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 MYOGP15173 224 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 SELPP16109 830 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 GNAQP50148 359 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 SP2Q02086 613 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 COL9A3Q14050 684 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-208ENST00000566723 GNPTABQ3T906 1256 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 BMP2KLQ5H9B9 411 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 CREB3L3Q68CJ9 461 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 ZFP91Q96JP5 570 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-208ENST00000566723 INPP4AQ96PE3 977 aaPredicted RBP17.54■□□□□ 0.4
SMPD3-208ENST00000566723 ANO2Q9NQ90 1003 aa17.54■□□□□ 0.4
SMPD3-208ENST00000566723 PARNO95453 639 aaKnown RBP17.53■□□□□ 0.4
SMPD3-208ENST00000566723 CALM1P0DP23 149 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 CALM2P0DP24 149 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 CALM3P0DP25 149 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 CKBP12277 381 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 ICAM3P32942 547 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 LIFRP42702 1097 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 MRPS9P82933 396 aaKnown RBP17.53■□□□□ 0.4
SMPD3-208ENST00000566723 PTK7Q13308 1070 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 ADGRE1Q14246 886 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 NECTIN1Q15223 517 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 CENPQQ7L2Z9 268 aaPredicted RBP17.53■□□□□ 0.4
SMPD3-208ENST00000566723 SMARCC2Q8TAQ2 1214 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 PHOSPHO2Q8TCD6 241 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 CUL5Q93034 780 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 MLXIPQ9HAP2 919 aa17.53■□□□□ 0.4
SMPD3-208ENST00000566723 PRRC2BQ5JSZ5 2229 aaKnown RBP17.52■□□□□ 0.4
SMPD3-208ENST00000566723 COL4A4P53420 1690 aaPredicted RBP17.52■□□□□ 0.4
SMPD3-208ENST00000566723 PIK3CDO00329 1044 aa17.52■□□□□ 0.4
SMPD3-208ENST00000566723 RXRAP19793 462 aa17.52■□□□□ 0.4
SMPD3-208ENST00000566723 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
SMPD3-208ENST00000566723 SRBD1Q8N5C6 995 aaKnown RBP17.52■□□□□ 0.4
SMPD3-208ENST00000566723 C16orf70Q9BSU1 422 aa17.52■□□□□ 0.4
SMPD3-208ENST00000566723 MEIS2O14770 477 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 FIBPO43427 364 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 CXCL10P02778 98 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 CA3P07451 260 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 KCNJ6P48051 423 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 SEMA3FQ13275 785 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 NEDD9Q14511 834 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 GPNMBQ14956 572 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 TRIM71Q2Q1W2 868 aaKnown RBP17.51■□□□□ 0.39
SMPD3-208ENST00000566723 PCNX4Q63HM2 1172 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 METTL7BQ6UX53 244 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 HERC6Q8IVU3 1022 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 SLC12A7Q9Y666 1083 aa17.51■□□□□ 0.39
SMPD3-208ENST00000566723 SPATA31C2B4DYI2 1134 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 NOP56O00567 594 aaKnown RBP17.5■□□□□ 0.39
SMPD3-208ENST00000566723 NBNO60934 754 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 LGALS2P05162 132 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 IGFBP4P22692 258 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 ZNF200P98182 395 aaPredicted RBP17.5■□□□□ 0.39
SMPD3-208ENST00000566723 RNF20Q5VTR2 975 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 XRRA1Q6P2D8 792 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 CNKSR3Q6P9H4 555 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 CMTR1Q8N1G2 835 aaKnown RBP17.5■□□□□ 0.39
SMPD3-208ENST00000566723 PPM1EQ8WY54 764 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 WNT8BQ93098 351 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 LRRC2Q9BYS8 371 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 MUC3AQ02505 3323 aa17.5■□□□□ 0.39
SMPD3-208ENST00000566723 H3BRB1 525 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms