RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 GGPS1O95749 300 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 CXCL10P02778 98 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 HOXD8P13378 290 aaPredicted RBP19.16■□□□□ 0.66
TSR3-202ENST00000566296 CCND2P30279 289 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 HOXA13P31271 388 aaPredicted RBP19.16■□□□□ 0.66
TSR3-202ENST00000566296 GRM4Q14833 912 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 PGM5Q15124 567 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 CYB5R4Q7L1T6 521 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 RALYLQ86SE5 291 aaKnown RBP19.16■□□□□ 0.66
TSR3-202ENST00000566296 RUFY2Q8WXA3 655 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 SPATA33Q96N06 139 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 IL25Q9H293 177 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 COG5Q9UP83 839 aa19.16■□□□□ 0.66
TSR3-202ENST00000566296 PALM3A6NDB9 673 aaPredicted RBP19.15■□□□□ 0.66
TSR3-202ENST00000566296 GCOM1H8Y6P7 765 aaPredicted RBP19.15■□□□□ 0.66
TSR3-202ENST00000566296 PPP1R11O60927 126 aaPredicted RBP19.15■□□□□ 0.66
TSR3-202ENST00000566296 NBNO60934 754 aa19.15■□□□□ 0.66
TSR3-202ENST00000566296 POLR2MP0CAP2 368 aa19.15■□□□□ 0.66
TSR3-202ENST00000566296 DEFB103AP81534 67 aa19.15■□□□□ 0.66
TSR3-202ENST00000566296 TFF2Q03403 129 aa19.15■□□□□ 0.66
TSR3-202ENST00000566296 GRB10Q13322 594 aa19.15■□□□□ 0.66
TSR3-202ENST00000566296 CELF3Q5SZQ8 465 aaKnown RBP19.15■□□□□ 0.66
TSR3-202ENST00000566296 MYSM1Q5VVJ2 828 aa19.15■□□□□ 0.66
TSR3-202ENST00000566296 STOX1Q6ZVD7 989 aa19.15■□□□□ 0.66
TSR3-202ENST00000566296 U3KPZ7 1027 aaPredicted RBP19.15■□□□□ 0.66
TSR3-202ENST00000566296 BRWD1Q9NSI6 2320 aa19.14■□□□□ 0.66
TSR3-202ENST00000566296 IFIT3O14879 490 aaKnown RBP19.14■□□□□ 0.65
TSR3-202ENST00000566296 SORBS3O60504 671 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 PPFIA4O75335 1185 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 COL9A1P20849 921 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 UBA1P22314 1058 aaKnown RBP19.14■□□□□ 0.65
TSR3-202ENST00000566296 IKBKEQ14164 716 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 GPNMBQ14956 572 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 SART3Q15020 963 aaKnown RBP19.14■□□□□ 0.65
TSR3-202ENST00000566296 TTC22Q5TAA0 569 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 KRT40Q6A162 431 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 VSIG10LQ86VR7 867 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 PIGSQ96S52 555 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 MLXIPQ9HAP2 919 aa19.14■□□□□ 0.65
TSR3-202ENST00000566296 LCHNA4D1U4 455 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 RGS20O76081 388 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 GJB5O95377 273 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 TGFB3P10600 412 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 BMP1P13497 986 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 KCNQ1P51787 676 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 WTAPQ15007 396 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 HSDL1Q3SXM5 330 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 GNPTABQ3T906 1256 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 ZNF618Q5T7W0 954 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 TMCO2Q7Z6W1 182 aaPredicted RBP19.13■□□□□ 0.65
TSR3-202ENST00000566296 FCHSD1Q86WN1 690 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 IL31RAQ8NI17 732 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 NECAB3Q96P71 396 aaPredicted RBP19.13■□□□□ 0.65
TSR3-202ENST00000566296 RIOX1Q9H6W3 641 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 EMSYQ7Z589 1322 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 MICAL3Q7RTP6 2002 aa19.13■□□□□ 0.65
TSR3-202ENST00000566296 SIP14410 1827 aa19.12■□□□□ 0.65
TSR3-202ENST00000566296 NOP56O00567 594 aaKnown RBP19.12■□□□□ 0.65
TSR3-202ENST00000566296 LGR5O75473 907 aa19.12■□□□□ 0.65
TSR3-202ENST00000566296 GSPT1P15170 499 aaKnown RBP19.12■□□□□ 0.65
TSR3-202ENST00000566296 TRIM71Q2Q1W2 868 aaKnown RBP19.12■□□□□ 0.65
TSR3-202ENST00000566296 NCOA7Q8NI08 942 aa19.12■□□□□ 0.65
TSR3-202ENST00000566296 GDPD5Q8WTR4 605 aa19.12■□□□□ 0.65
TSR3-202ENST00000566296 RAD9AQ99638 391 aa19.12■□□□□ 0.65
TSR3-202ENST00000566296 PNMA6FA0A0J9YX94 578 aa19.11■□□□□ 0.65
TSR3-202ENST00000566296 C17orf102A2RUQ5 167 aa19.11■□□□□ 0.65
TSR3-202ENST00000566296 CYP21A2P08686 494 aa19.11■□□□□ 0.65
TSR3-202ENST00000566296 ZNF200P98182 395 aaPredicted RBP19.11■□□□□ 0.65
TSR3-202ENST00000566296 TRAF7Q6Q0C0 670 aa19.11■□□□□ 0.65
TSR3-202ENST00000566296 WNT8BQ93098 351 aa19.11■□□□□ 0.65
TSR3-202ENST00000566296 HLA-CQ95604 372 aa19.11■□□□□ 0.65
TSR3-202ENST00000566296 TGS1Q96RS0 853 aaKnown RBP19.11■□□□□ 0.65
TSR3-202ENST00000566296 MTUS1Q9ULD2 1270 aa19.11■□□□□ 0.65
TSR3-202ENST00000566296 RSPH10B2B2RC85 870 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 LPXNO60711 386 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 STAM2O75886 525 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 AMHP03971 560 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 RSPH10BP0C881 870 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 THPOP40225 353 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 MBTPS1Q14703 1052 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 SLC35G1Q2M3R5 365 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 TCTN1Q2MV58 587 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 FAM117BQ6P1L5 589 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 SPRED2Q7Z698 418 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 CATIPQ7Z7H3 387 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 SERINC5Q86VE9 423 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 C16orf70Q9BSU1 422 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 PPP4R2Q9NY27 417 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 LMCD1Q9NZU5 365 aa19.1■□□□□ 0.65
TSR3-202ENST00000566296 BDP1A6H8Y1 2624 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 TRANK1O15050 2925 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 FRMPD4Q14CM0 1322 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 H3BRB1 525 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 CYTH3O43739 400 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 LGALS2P05162 132 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 PDE4AP27815 886 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 ERVK-21P61565 698 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 SP2Q02086 613 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 NEDD9Q14511 834 aa19.09■□□□□ 0.65
TSR3-202ENST00000566296 GPKOWQ92917 476 aaPredicted RBP eCLIP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms