RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 POTEDQ86YR6 584 aa21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 CLSTN2Q9H4D0 955 aa21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 KCNH3Q9ULD8 1083 aa21.57■■□□□ 1.04
CSPG4P13-201ENST00000565545 FRMPD4Q14CM0 1322 aa21.56■■□□□ 1.04
CSPG4P13-201ENST00000565545 SLC37A4O43826 429 aa21.56■■□□□ 1.04
CSPG4P13-201ENST00000565545 INHAP05111 366 aa21.56■■□□□ 1.04
CSPG4P13-201ENST00000565545 ZNF76P36508 570 aa21.56■■□□□ 1.04
CSPG4P13-201ENST00000565545 GRIN1Q05586 938 aa21.56■■□□□ 1.04
CSPG4P13-201ENST00000565545 TMEM266Q2M3C6 531 aa21.56■■□□□ 1.04
CSPG4P13-201ENST00000565545 NSMFQ6X4W1 530 aa21.56■■□□□ 1.04
CSPG4P13-201ENST00000565545 RAB34Q9BZG1 259 aa21.56■■□□□ 1.04
CSPG4P13-201ENST00000565545 CNMDO75829 334 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 ZNF202O95125 648 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 TXLNAP40222 546 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 GCLCP48506 637 aaPredicted RBP21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 FXR2P51116 673 aaKnown RBP eCLIP21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 ZNF445P59923 1031 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 BAATQ14032 418 aaPredicted RBP21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 IL17AQ16552 155 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 XRRA1Q6P2D8 792 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 POTEEQ6S8J3 1075 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 SLFN12Q8IYM2 578 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 PXYLP1Q8TE99 480 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 DEFB118Q96PH6 123 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 COL20A1Q9P218 1284 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 RBPJLQ9UBG7 517 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 PFASO15067 1338 aa21.55■■□□□ 1.04
CSPG4P13-201ENST00000565545 MARCH6O60337 910 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 EVI5O60447 810 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 PDIA5Q14554 519 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 ELOA2Q8IYF1 753 aaPredicted RBP21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 ANKRD13CQ8N6S4 541 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 SHCBP1Q8NEM2 672 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 SYMPKQ92797 1274 aaKnown RBP21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 FAM20AQ96MK3 541 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 PAGR1Q9BTK6 254 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 TNMDQ9H2S6 317 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 KCNMB3Q9NPA1 279 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 USP25Q9UHP3 1055 aa21.54■■□□□ 1.04
CSPG4P13-201ENST00000565545 SETQ01105 290 aaPredicted RBP21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 IRF5Q13568 498 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 SPECC1Q5M775 1068 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 PCNX4Q63HM2 1172 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 SLC30A10Q6XR72 485 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 NIPA1Q7RTP0 329 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 CCDC34Q96HJ3 373 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 MOV10L1Q9BXT6 1211 aaKnown RBP21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 CCSER1Q9C0I3 900 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 MROH8Q9H579 483 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 A1CFQ9NQ94 594 aaKnown RBP21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 CYP39A1Q9NYL5 469 aa21.53■■□□□ 1.04
CSPG4P13-201ENST00000565545 FAM86B1E9PN63 330 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 FAM86B2P0C5J1 330 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 CAPN2P17655 700 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 TXKP42681 527 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 CCNA1P78396 465 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 CEP55Q53EZ4 464 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 PRR16Q569H4 304 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 KANK3Q6NY19 840 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 RBM43Q6ZSC3 357 aaKnown RBP21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 IGSF22Q8N9C0 903 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 TAAR1Q96RJ0 339 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 RMDN3Q96TC7 470 aa21.52■■□□□ 1.04
CSPG4P13-201ENST00000565545 SLC26A4O43511 780 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 UBA7P41226 1012 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 ERVK-9P63128 1117 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 ERVK-24P63145 666 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 ARHGEF16Q5VV41 709 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 NCAPG2Q86XI2 1143 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 ANKRD35Q8N283 1001 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 NSUN6Q8TEA1 469 aaKnown RBP21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 HAS1Q92839 578 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 LENG9Q96B70 501 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 EPSTI1Q96J88 318 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 MXRA8Q9BRK3 442 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 SDF4Q9BRK5 362 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 PXMP2Q9NR77 195 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 CCDC39Q9UFE4 941 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 HOOK1Q9UJC3 728 aaKnown RBP21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 PCDHA12Q9UN75 941 aa21.51■■□□□ 1.03
CSPG4P13-201ENST00000565545 IGLV3-22A0A075B6J6 115 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 MEIS1O00470 390 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 TECP42680 631 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 GSE1Q14687 1217 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 PGM5Q15124 567 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 KRBA2Q6ZNG9 492 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 PLA2G4DQ86XP0 818 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 GPRC5AQ8NFJ5 357 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 DNERQ8NFT8 737 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 ETNPPLQ8TBG4 499 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 PDCD2LQ9BRP1 358 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 TTC12Q9H892 705 aaPredicted RBP21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 TXNRD2Q9NNW7 524 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 MORF4L1Q9UBU8 362 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 STK24Q9Y6E0 443 aa21.5■■□□□ 1.03
CSPG4P13-201ENST00000565545 SYCE3A1L190 88 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 POLR2DO15514 142 aaKnown RBP21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 STAM2O75886 525 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 ERCC3P19447 782 aa21.49■■□□□ 1.03
CSPG4P13-201ENST00000565545 CAMK4Q16566 473 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms