RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 TRIM66O15016 1216 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 PPFIA4O75335 1185 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 GOLGA6DP0CG33 693 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 PAFAH1B1P43034 410 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 RHBDL3P58872 404 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 GFPT1Q06210 699 aaPredicted RBP8.03□□□□□ -1.12
SMG1-210ENST00000565224 SEPT2Q15019 361 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 PPP1R18Q6NYC8 613 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 C10orf67Q8IYJ2 551 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 MYOCDQ8IZQ8 938 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 RNF10Q8N5U6 811 aaKnown RBP8.03□□□□□ -1.12
SMG1-210ENST00000565224 HDAC7Q8WUI4 952 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 COA7Q96BR5 231 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 NUDT12Q9BQG2 462 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 TANGO6Q9C0B7 1094 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 CD209Q9NNX6 404 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 GOLGA6AQ9NYA3 693 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 RSPH14Q9UHP6 348 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 DMGDHQ9UI17 866 aaKnown RBP8.03□□□□□ -1.12
SMG1-210ENST00000565224 TSKSQ9UJT2 592 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 SBF2Q86WG5 1849 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 PLIN4Q96Q06 1357 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 RBAK-RBAKDNI3L0D1 243 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 EDIL3O43854 480 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 TNFRSF8P28908 595 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 SLC1A4P43007 532 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 MATR3P43243 847 aaKnown RBP eCLIP8.03□□□□□ -1.12
SMG1-210ENST00000565224 TNNI2P48788 182 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 GPSM2P81274 684 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 RASSF7Q02833 373 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 LRRC41Q15345 812 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 ZCWPW2Q504Y3 356 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 HGSNATQ68CP4 663 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 HAUS3Q68CZ6 603 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 PPP4R3AQ6IN85 833 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 EMBQ6PCB8 327 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 KCNK18Q7Z418 384 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 GPIHBP1Q8IV16 184 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 SLF2Q8IX21 1173 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 GLIS3Q8NEA6 775 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 SYN2Q92777 582 aaPredicted RBP8.03□□□□□ -1.12
SMG1-210ENST00000565224 FAM163AQ96GL9 167 aaPredicted RBP8.03□□□□□ -1.12
SMG1-210ENST00000565224 PSMB7Q99436 277 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
SMG1-210ENST00000565224 CEP72Q9P209 647 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 STIM2Q9P246 746 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 COL4A3BPQ9Y5P4 624 aa8.03□□□□□ -1.12
SMG1-210ENST00000565224 GOLGA8KD6RF30 607 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 NCK2O43639 380 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 SHOX2O60902 331 aaPredicted RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 UFL1O94874 794 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 SERPING1P05155 500 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 SNHG28P0DPA3 235 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 IL1R1P14778 569 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 CXCR5P32302 372 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 EPHB4P54760 987 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 FKBP3Q00688 224 aaKnown RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 KCNMA1Q12791 1236 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 COASYQ13057 564 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 SLC9C1Q4G0N8 1177 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 CCDC40Q4G0X9 1142 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 GLE1Q53GS7 698 aaKnown RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 TDRD12Q587J7 1177 aaKnown RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 SFMBT2Q5VUG0 894 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 AMIGO3Q86WK7 504 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 LRRC47Q8N1G4 583 aaKnown RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 ANKRD13CQ8N6S4 541 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 CNBD1Q8NA66 436 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 MTMR8Q96EF0 704 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 ZFP91Q96JP5 570 aaPredicted RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 HINFPQ9BQA5 517 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 TLR10Q9BXR5 811 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 LUC7LQ9NQ29 371 aaKnown RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 MTMR4Q9NYA4 1195 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 SMARCAL1Q9NZC9 954 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 RNF14Q9UBS8 474 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 SALL4Q9UJQ4 1053 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 CCNL1Q9UK58 526 aaPredicted RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 GAKO14976 1311 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 PNMA6FA0A0J9YX94 578 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 TRAF5O00463 557 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 OPA1O60313 960 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 GNA14O95837 355 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 ERCC3P19447 782 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 ATP2B4P23634 1241 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 NAP1L1P55209 391 aaKnown RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 SLC7A5Q01650 507 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 ECM1Q16610 540 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 CFAP221Q4G0U5 840 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 FAM26FQ5R3K3 315 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 MFSD14BQ5SR56 506 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 KLHDC7AQ5VTJ3 777 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 C8orf74Q6P047 294 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 CAVIN3Q969G5 261 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 DNAJC19Q96DA6 116 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 CEP63Q96MT8 703 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 SH3GL2Q99962 352 aa8.02□□□□□ -1.13
SMG1-210ENST00000565224 LSM14BQ9BX40 385 aaKnown RBP8.02□□□□□ -1.13
SMG1-210ENST00000565224 TRIM34Q9BYJ4 488 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms