RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 RAD54LQ92698 747 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 GPKOWQ92917 476 aaPredicted RBP eCLIP8.44□□□□□ -1.06
ATXN3-249ENST00000564606 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 MMRN2Q9H8L6 949 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 PDE11AQ9HCR9 933 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 PODXL2Q9NZ53 605 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 SYNPO2Q9UMS6 1093 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 SNX12Q9UMY4 172 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 GDAQ9Y2T3 454 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 PCDHA13Q9Y5I0 950 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 COL4A3BPQ9Y5P4 624 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 PITPNM2Q9BZ72 1349 aa8.44□□□□□ -1.06
ATXN3-249ENST00000564606 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 MYH2Q9UKX2 1941 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 CYP2D7A0A087X1C5 515 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 hCG_1642624A0A1W2PR95 340 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 SRRM3A6NNA2 597 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 BTNL10A8MVZ5 291 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 SNAP23O00161 211 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 GNPATO15228 680 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 CALUO43852 315 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 KRT18P05783 430 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 USP17L8P0C7I0 530 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 MUTP22033 750 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 TECP42680 631 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 NAP1L1P55209 391 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 TDRD12Q587J7 1177 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 DNAJC21Q5F1R6 531 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 HYIQ5T013 277 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 ANKRD40Q6AI12 368 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 B4GALNT4Q76KP1 1039 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 C1orf131Q8NDD1 294 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 CERKQ8TCT0 537 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 WHAMMQ8TF30 809 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 PPM1EQ8WY54 764 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 STAMQ92783 540 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 NAP1L3Q99457 506 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 TTYH3Q9C0H2 523 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 COA1Q9GZY4 146 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 RASSF4Q9H2L5 321 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 DHX36Q9H2U1 1008 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 SH2D4AQ9H788 454 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 ZSWIM4Q9H7M6 989 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 IL17RBQ9NRM6 502 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 TFCP2L1Q9NZI6 479 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 CCNL1Q9UK58 526 aaPredicted RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 PCDHA12Q9UN75 941 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 DIS3Q9Y2L1 958 aaKnown RBP8.43□□□□□ -1.06
ATXN3-249ENST00000564606 A0A1B0GUL6 1792 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 STRCQ7RTU9 1775 aa8.43□□□□□ -1.06
ATXN3-249ENST00000564606 MYH13Q9UKX3 1938 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 GOLGA6CA6NDK9 693 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 PPFIA4O75335 1185 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 FLOT1O75955 427 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 GOLGA6DP0CG33 693 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 EPB41P11171 864 aaKnown RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 GBP1P32455 592 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 TXKP42681 527 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 KIF11P52732 1056 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 HNRNPH2P55795 449 aaKnown RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 VSNL1P62760 191 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 SETQ01105 290 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 IL17AQ16552 155 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 ARSIQ5FYB1 569 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 FAM26FQ5R3K3 315 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 CFAP58Q5T655 872 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 C8orf74Q6P047 294 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 CCNI2Q6ZMN8 369 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 C2CD5Q86YS7 1000 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 IRF2BP1Q8IU81 584 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 LINC00116Q8NCU8 138 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 NKX2-3Q8TAU0 364 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 DCAF4Q8WV16 495 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 LRRC45Q96CN5 670 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 PBKQ96KB5 322 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 MTMR9Q96QG7 549 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 CRAMP1Q96RY5 1269 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 CHP1Q99653 195 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 MTRQ99707 1265 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 DUSP9Q99956 384 aaKnown RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 CD209Q9NNX6 404 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 GOLGA6AQ9NYA3 693 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 DDX25Q9UHL0 483 aaKnown RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 INTUQ9ULD6 942 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 RABGAP1Q9Y3P9 1069 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 GAKO14976 1311 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 FAM205AQ6ZU69 1335 aa8.42□□□□□ -1.06
ATXN3-249ENST00000564606 COL1A1P02452 1464 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 COL5A3P25940 1745 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-249ENST00000564606 TNRC6CQ9HCJ0 1690 aaKnown RBP8.41□□□□□ -1.06
ATXN3-249ENST00000564606 COL16A1Q07092 1604 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-249ENST00000564606 FLT1P17948 1338 aa8.41□□□□□ -1.06
ATXN3-249ENST00000564606 CCDC188H7C350 402 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms