RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 SRBD1Q8N5C6 995 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 IL31RAQ8NI17 732 aa20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 AFG1LQ8WV93 481 aa20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 LZTS2Q9BRK4 669 aa20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 TCF20Q9UGU0 1960 aaKnown RBP20.13■□□□□ 0.81
MAP1LC3B-204ENST00000563720 PFKMP08237 780 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 MMP3P08254 477 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CALM1P0DP23 149 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CALM2P0DP24 149 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CALM3P0DP25 149 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 MYCLP12524 364 aaPredicted RBP20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 GNAQP50148 359 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 NBPF20Q3BBV1 942 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 TSGA10IPQ3SY00 556 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 SGMS1Q86VZ5 419 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 FCHSD1Q86WN1 690 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 RAB11FIP4Q86YS3 637 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CMTR1Q8N1G2 835 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 RRP36Q96EU6 259 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 NEK1Q96PY6 1258 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 TRMT13Q9NUP7 481 aaKnown RBP20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 SLC12A7Q9Y666 1083 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 MRVI1Q9Y6F6 885 aa20.12■□□□□ 0.81
MAP1LC3B-204ENST00000563720 FRMPD4Q14CM0 1322 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 RFXAPO00287 272 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CA3P07451 260 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 SUPT20HL2P0C7V6 817 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CYP2C9P11712 490 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 EXOSC10Q01780 885 aaKnown RBP20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 ADCK5Q3MIX3 580 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 NFRKBQ6P4R8 1299 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 DEFB128Q7Z7B8 93 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 PPP1R13LQ8WUF5 828 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 EMID1Q96A84 441 aaPredicted RBP20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CERS4Q9HA82 394 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 MTCH2Q9Y6C9 303 aa20.11■□□□□ 0.81
MAP1LC3B-204ENST00000563720 VWCEQ96DN2 955 aa20.1■□□□□ 0.81
MAP1LC3B-204ENST00000563720 SEC63Q9UGP8 760 aaKnown RBP20.1■□□□□ 0.81
MAP1LC3B-204ENST00000563720 NCOR1O75376 2440 aa20.1■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CHD7Q9P2D1 2997 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 ACTN1P12814 892 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 CCND2P30279 289 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 FAM47CQ5HY64 1035 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 TMTC3Q6ZXV5 915 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 DHX32Q7L7V1 743 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 FANCBQ8NB91 859 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 KAT2BQ92831 832 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 ZFP91Q96JP5 570 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 TCEANC2Q96MN5 208 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 COG5Q9UP83 839 aa20.09■□□□□ 0.81
MAP1LC3B-204ENST00000563720 PIK3CDO00329 1044 aa20.08■□□□□ 0.81
MAP1LC3B-204ENST00000563720 POU3F3P20264 500 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3B-204ENST00000563720 PTPN11Q06124 597 aaPredicted RBP20.08■□□□□ 0.81
MAP1LC3B-204ENST00000563720 LAMC2Q13753 1193 aa20.08■□□□□ 0.81
MAP1LC3B-204ENST00000563720 KCNV1Q6PIU1 500 aa20.08■□□□□ 0.81
MAP1LC3B-204ENST00000563720 MICU3Q86XE3 530 aa20.08■□□□□ 0.81
MAP1LC3B-204ENST00000563720 GPKOWQ92917 476 aaPredicted RBP eCLIP20.08■□□□□ 0.81
MAP1LC3B-204ENST00000563720 HCN4Q9Y3Q4 1203 aa20.08■□□□□ 0.81
MAP1LC3B-204ENST00000563720 TET1Q8NFU7 2136 aa20.08■□□□□ 0.8
MAP1LC3B-204ENST00000563720 MEIS2O14770 477 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 CASTP20810 708 aaKnown RBP20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 MRPS9P82933 396 aaKnown RBP20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 SP2Q02086 613 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 KRT32Q14532 448 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 DGKDQ16760 1214 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 MYSM1Q5VVJ2 828 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 APOA5Q6Q788 366 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 DHX37Q8IY37 1157 aaKnown RBP20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 PPTC7Q8NI37 304 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 ARNTL2Q8WYA1 636 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 KCNB2Q92953 911 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 SLC9A7Q96T83 725 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 EPHX3Q9H6B9 360 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 BRPF3Q9ULD4 1205 aa20.07■□□□□ 0.8
MAP1LC3B-204ENST00000563720 hCG_1642624A0A1W2PR95 340 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 EPOPA6NHQ4 379 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 TGFB3P10600 412 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 UBA1P22314 1058 aaKnown RBP20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 HOXD11P31277 338 aaPredicted RBP20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 CELF3Q5SZQ8 465 aaKnown RBP20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 KRT40Q6A162 431 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 CCDC82Q8N4S0 544 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 SMARCC2Q8TAQ2 1214 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 PHOSPHO2Q8TCD6 241 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 LRFN3Q9BTN0 628 aa20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 FTOQ9C0B1 505 aaKnown RBP eCLIP20.06■□□□□ 0.8
MAP1LC3B-204ENST00000563720 GGPS1O95749 300 aa20.05■□□□□ 0.8
MAP1LC3B-204ENST00000563720 HOXD8P13378 290 aaPredicted RBP20.05■□□□□ 0.8
MAP1LC3B-204ENST00000563720 RFC2P35250 354 aa20.05■□□□□ 0.8
MAP1LC3B-204ENST00000563720 CHMP4BP1P59074 171 aa20.05■□□□□ 0.8
MAP1LC3B-204ENST00000563720 SYNE3Q6ZMZ3 975 aa20.05■□□□□ 0.8
MAP1LC3B-204ENST00000563720 SESTD1Q86VW0 696 aa20.05■□□□□ 0.8
MAP1LC3B-204ENST00000563720 RETREG2Q8NC44 543 aa20.05■□□□□ 0.8
MAP1LC3B-204ENST00000563720 CUL5Q93034 780 aa20.05■□□□□ 0.8
MAP1LC3B-204ENST00000563720 CNTNAP5Q8WYK1 1306 aa20.04■□□□□ 0.8
MAP1LC3B-204ENST00000563720 KAT6AQ92794 2004 aa20.04■□□□□ 0.8
MAP1LC3B-204ENST00000563720 SORBS3O60504 671 aa20.04■□□□□ 0.8
MAP1LC3B-204ENST00000563720 STAM2O75886 525 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms