RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TGFB3P10600 412 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 RARBP10826 455 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 ATP2B1P20020 1258 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 MTFR1Q15390 333 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 RILPL1Q5EBL4 403 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 PPP4R3AQ6IN85 833 aa21.36■■□□□ 1.01
RAB40C-207ENST00000563109 IGLV3-22A0A075B6J6 115 aa21.35■■□□□ 1.01
RAB40C-207ENST00000563109 CYP3A7-CYP3A51PA0A087WV96 503 aa21.35■■□□□ 1.01
RAB40C-207ENST00000563109 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.35■■□□□ 1.01
RAB40C-207ENST00000563109 CYP3A7P24462 503 aa21.35■■□□□ 1.01
RAB40C-207ENST00000563109 RESTQ13127 1097 aa21.35■■□□□ 1.01
RAB40C-207ENST00000563109 Q4G0T1 1027 aa21.35■■□□□ 1.01
RAB40C-207ENST00000563109 DUSP28Q4G0W2 176 aa21.35■■□□□ 1.01
RAB40C-207ENST00000563109 TTC38Q5R3I4 469 aa21.35■■□□□ 1.01
RAB40C-207ENST00000563109 CYP2W1Q8TAV3 490 aa21.35■■□□□ 1.01
RAB40C-207ENST00000563109 SMPD1P17405 629 aa21.34■■□□□ 1.01
RAB40C-207ENST00000563109 ORC2Q13416 577 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-207ENST00000563109 NEDD9Q14511 834 aa21.34■■□□□ 1.01
RAB40C-207ENST00000563109 FOXD4L5Q5VV16 416 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-207ENST00000563109 GIMAP8Q8ND71 665 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-207ENST00000563109 FOXD4L4Q8WXT5 416 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-207ENST00000563109 SPC25Q9HBM1 224 aa21.34■■□□□ 1.01
RAB40C-207ENST00000563109 PAK6Q9NQU5 681 aaPredicted RBP21.34■■□□□ 1.01
RAB40C-207ENST00000563109 KCNH7Q9NS40 1196 aa21.34■■□□□ 1.01
RAB40C-207ENST00000563109 DDX41Q9UJV9 622 aaKnown RBP21.34■■□□□ 1.01
RAB40C-207ENST00000563109 NEMFO60524 1076 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 DUSP11O75319 330 aaKnown RBP21.33■■□□□ 1.01
RAB40C-207ENST00000563109 ARIH2O95376 493 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 GH1P01241 217 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 UBA1P22314 1058 aaKnown RBP21.33■■□□□ 1.01
RAB40C-207ENST00000563109 SEMA3FQ13275 785 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 LY6KQ17RY6 165 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 ANO1Q5XXA6 986 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 CCDC62Q6P9F0 684 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 TLK2Q86UE8 772 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 OR6J1Q8NGC5 347 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 MBOAT7Q96N66 472 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 IPO9Q96P70 1041 aaKnown RBP21.33■■□□□ 1.01
RAB40C-207ENST00000563109 SENP7Q9BQF6 1050 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 ZNF577Q9BSK1 485 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 TMEM106CQ9BVX2 250 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 AP5M1Q9H0R1 490 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 AGO4Q9HCK5 861 aaKnown RBP21.33■■□□□ 1.01
RAB40C-207ENST00000563109 PKD2L1Q9P0L9 805 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 TCEAL9Q9UHQ7 104 aa21.33■■□□□ 1.01
RAB40C-207ENST00000563109 SLC37A4O43826 429 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 EDIL3O43854 480 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 MARCH6O60337 910 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 GGPS1O95749 300 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 F13A1P00488 732 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 ARP10275 920 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 MCM7P33993 719 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 NUCB2P80303 420 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 PKP1Q13835 747 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 MYSM1Q5VVJ2 828 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 DHX37Q8IY37 1157 aaKnown RBP21.32■■□□□ 1
RAB40C-207ENST00000563109 LENG9Q96B70 501 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 LENG1Q96BZ8 264 aaPredicted RBP21.32■■□□□ 1
RAB40C-207ENST00000563109 DEFB118Q96PH6 123 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 SDF4Q9BRK5 362 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 XPNPEP3Q9NQH7 507 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 Q9Y3F1 56 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 DOCK5Q9H7D0 1870 aa21.32■■□□□ 1
RAB40C-207ENST00000563109 IPO5O00410 1097 aaKnown RBP21.31■■□□□ 1
RAB40C-207ENST00000563109 ADCY6O43306 1168 aa21.31■■□□□ 1
RAB40C-207ENST00000563109 KCNA2P16389 499 aa21.31■■□□□ 1
RAB40C-207ENST00000563109 POTEDQ86YR6 584 aa21.31■■□□□ 1
RAB40C-207ENST00000563109 MLXIPQ9HAP2 919 aa21.31■■□□□ 1
RAB40C-207ENST00000563109 GNEQ9Y223 722 aaKnown RBP21.31■■□□□ 1
RAB40C-207ENST00000563109 SYNRGQ9UMZ2 1314 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 MSH4O15457 936 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 BAG4O95429 457 aaKnown RBP21.3■■□□□ 1
RAB40C-207ENST00000563109 BRD1O95696 1058 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 GJB1P08034 283 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 LAMC2Q13753 1193 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 ZNF174Q15697 407 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 CALCRLQ16602 461 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 BRDTQ58F21 947 aaPredicted RBP21.3■■□□□ 1
RAB40C-207ENST00000563109 CELF3Q5SZQ8 465 aaKnown RBP21.3■■□□□ 1
RAB40C-207ENST00000563109 GJC2Q5T442 439 aaPredicted RBP21.3■■□□□ 1
RAB40C-207ENST00000563109 TNS4Q8IZW8 715 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 COPS5Q92905 334 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 TBC1D22BQ9NU19 505 aa21.3■■□□□ 1
RAB40C-207ENST00000563109 CIZ1Q9ULV3 898 aaPredicted RBP21.3■■□□□ 1
RAB40C-207ENST00000563109 NFASCO94856 1347 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 WNT7AO00755 349 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 TBX3O15119 743 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 DYNC1LI2O43237 492 aaPredicted RBP21.29■■□□□ 1
RAB40C-207ENST00000563109 TOB1P50616 345 aaPredicted RBP21.29■■□□□ 1
RAB40C-207ENST00000563109 SP2Q02086 613 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 ARHGAP1Q07960 439 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 NBR1Q14596 966 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 TMEM63BQ5T3F8 832 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 LHX8Q68G74 356 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 METTL7BQ6UX53 244 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 SLFN12Q8IYM2 578 aa21.29■■□□□ 1
RAB40C-207ENST00000563109 EMID1Q96A84 441 aaPredicted RBP21.29■■□□□ 1
RAB40C-207ENST00000563109 UPF3AQ9H1J1 476 aaKnown RBP21.29■■□□□ 1
RAB40C-207ENST00000563109 JPH1Q9HDC5 661 aaPredicted RBP21.29■■□□□ 1
RAB40C-207ENST00000563109 PCDHB6Q9Y5E3 794 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms