RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 CNKSR3Q6P9H4 555 aa24.6■■□□□ 1.53
GGA2-204ENST00000563047 TMCO2Q7Z6W1 182 aaPredicted RBP24.6■■□□□ 1.53
GGA2-204ENST00000563047 VSIG10LQ86VR7 867 aa24.6■■□□□ 1.53
GGA2-204ENST00000563047 SAMD3Q8N6K7 520 aa24.6■■□□□ 1.53
GGA2-204ENST00000563047 IL31RAQ8NI17 732 aa24.6■■□□□ 1.53
GGA2-204ENST00000563047 WNT8BQ93098 351 aa24.6■■□□□ 1.53
GGA2-204ENST00000563047 SORBS3O60504 671 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 PARNO95453 639 aaKnown RBP24.59■■□□□ 1.53
GGA2-204ENST00000563047 CYP21A2P08686 494 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 BMP1P13497 986 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 DEFB103AP81534 67 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 ZNF200P98182 395 aaPredicted RBP24.59■■□□□ 1.53
GGA2-204ENST00000563047 SP2Q02086 613 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 PTK7Q13308 1070 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 GRM4Q14833 912 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 SKIV2LQ15477 1246 aaKnown RBP24.59■■□□□ 1.53
GGA2-204ENST00000563047 TRIM71Q2Q1W2 868 aaKnown RBP24.59■■□□□ 1.53
GGA2-204ENST00000563047 HSDL1Q3SXM5 330 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 CELF3Q5SZQ8 465 aaKnown RBP24.59■■□□□ 1.53
GGA2-204ENST00000563047 TTC22Q5TAA0 569 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 TRAF7Q6Q0C0 670 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 HOMER1Q86YM7 354 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 IL27Q8NEV9 243 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 RIOX1Q9H6W3 641 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 SENP2Q9HC62 589 aa24.59■■□□□ 1.53
GGA2-204ENST00000563047 TCF20Q9UGU0 1960 aaKnown RBP24.58■■□□□ 1.53
GGA2-204ENST00000563047 LCHNA4D1U4 455 aa24.58■■□□□ 1.53
GGA2-204ENST00000563047 PTH1RQ03431 593 aa24.58■■□□□ 1.53
GGA2-204ENST00000563047 TRDNQ13061 729 aa24.58■■□□□ 1.53
GGA2-204ENST00000563047 HIC1Q14526 733 aa24.58■■□□□ 1.53
GGA2-204ENST00000563047 KCNV1Q6PIU1 500 aa24.58■■□□□ 1.53
GGA2-204ENST00000563047 ZFP91Q96JP5 570 aaPredicted RBP24.58■■□□□ 1.53
GGA2-204ENST00000563047 PIGSQ96S52 555 aa24.58■■□□□ 1.53
GGA2-204ENST00000563047 NCOR1O75376 2440 aa24.58■■□□□ 1.53
GGA2-204ENST00000563047 BAZ2BQ9UIF8 2168 aaKnown RBP24.57■■□□□ 1.52
GGA2-204ENST00000563047 CYTH3O43739 400 aa24.57■■□□□ 1.52
GGA2-204ENST00000563047 PPFIA4O75335 1185 aa24.57■■□□□ 1.52
GGA2-204ENST00000563047 GGPS1O95749 300 aa24.57■■□□□ 1.52
GGA2-204ENST00000563047 GRB10Q13322 594 aa24.57■■□□□ 1.52
GGA2-204ENST00000563047 ZNF618Q5T7W0 954 aa24.57■■□□□ 1.52
GGA2-204ENST00000563047 GPKOWQ92917 476 aaPredicted RBP eCLIP24.57■■□□□ 1.52
GGA2-204ENST00000563047 SPATA33Q96N06 139 aa24.57■■□□□ 1.52
GGA2-204ENST00000563047 TAF6LQ9Y6J9 622 aa24.57■■□□□ 1.52
GGA2-204ENST00000563047 GCOM1H8Y6P7 765 aaPredicted RBP24.56■■□□□ 1.52
GGA2-204ENST00000563047 IFIT3O14879 490 aaKnown RBP24.56■■□□□ 1.52
GGA2-204ENST00000563047 LPXNO60711 386 aa24.56■■□□□ 1.52
GGA2-204ENST00000563047 POLR2MP0CAP2 368 aa24.56■■□□□ 1.52
GGA2-204ENST00000563047 UBA1P22314 1058 aaKnown RBP24.56■■□□□ 1.52
GGA2-204ENST00000563047 KCNQ1P51787 676 aa24.56■■□□□ 1.52
GGA2-204ENST00000563047 MBTPS1Q14703 1052 aa24.56■■□□□ 1.52
GGA2-204ENST00000563047 NECAB3Q96P71 396 aaPredicted RBP24.56■■□□□ 1.52
GGA2-204ENST00000563047 ABHD14A-ACY1A0A1B0GW23 586 aa24.55■■□□□ 1.52
GGA2-204ENST00000563047 TGFB3P10600 412 aa24.55■■□□□ 1.52
GGA2-204ENST00000563047 CCND2P30279 289 aa24.55■■□□□ 1.52
GGA2-204ENST00000563047 AAK1Q2M2I8 961 aa24.55■■□□□ 1.52
GGA2-204ENST00000563047 FCHSD1Q86WN1 690 aa24.55■■□□□ 1.52
GGA2-204ENST00000563047 C16orf70Q9BSU1 422 aa24.55■■□□□ 1.52
GGA2-204ENST00000563047 ZBED2Q9BTP6 218 aa24.55■■□□□ 1.52
GGA2-204ENST00000563047 U3KPZ7 1027 aaPredicted RBP24.55■■□□□ 1.52
GGA2-204ENST00000563047 COL4A4P53420 1690 aaPredicted RBP24.55■■□□□ 1.52
GGA2-204ENST00000563047 BDP1A6H8Y1 2624 aa24.54■■□□□ 1.52
GGA2-204ENST00000563047 CHMLP26374 656 aa24.54■■□□□ 1.52
GGA2-204ENST00000563047 TROAPQ12815 778 aa24.54■■□□□ 1.52
GGA2-204ENST00000563047 BCAS3Q9H6U6 928 aa24.54■■□□□ 1.52
GGA2-204ENST00000563047 PNMA6FA0A0J9YX94 578 aa24.53■■□□□ 1.52
GGA2-204ENST00000563047 GJB5O95377 273 aa24.53■■□□□ 1.52
GGA2-204ENST00000563047 TRAF1Q13077 416 aa24.53■■□□□ 1.52
GGA2-204ENST00000563047 WTAPQ15007 396 aa24.53■■□□□ 1.52
GGA2-204ENST00000563047 RUFY2Q8WXA3 655 aa24.53■■□□□ 1.52
GGA2-204ENST00000563047 ERICH2A1L162 156 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 E7EWF7 191 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 COL9A1P20849 921 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 IKBKEQ14164 716 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 SERINC5Q86VE9 423 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 GDPD5Q8WTR4 605 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 RAD9AQ99638 391 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 MLXIPQ9HAP2 919 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 COG5Q9UP83 839 aa24.52■■□□□ 1.52
GGA2-204ENST00000563047 EFCAB14O75071 495 aa24.51■■□□□ 1.51
GGA2-204ENST00000563047 LGR5O75473 907 aa24.51■■□□□ 1.51
GGA2-204ENST00000563047 MRPS9P82933 396 aaKnown RBP24.51■■□□□ 1.51
GGA2-204ENST00000563047 RALYLQ86SE5 291 aaKnown RBP24.51■■□□□ 1.51
GGA2-204ENST00000563047 NCOA7Q8NI08 942 aa24.51■■□□□ 1.51
GGA2-204ENST00000563047 FRMPD4Q14CM0 1322 aa24.51■■□□□ 1.51
GGA2-204ENST00000563047 HOXC8P31273 242 aa24.5■■□□□ 1.51
GGA2-204ENST00000563047 ANTXR2P58335 489 aa24.5■■□□□ 1.51
GGA2-204ENST00000563047 MKRN4PQ13434 485 aaPredicted RBP24.5■■□□□ 1.51
GGA2-204ENST00000563047 IGDCC4Q8TDY8 1250 aa24.5■■□□□ 1.51
GGA2-204ENST00000563047 C17orf102A2RUQ5 167 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 LINC01553A4QN01 128 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 RSPH10B2B2RC85 870 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 H3BRB1 525 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 LGALS2P05162 132 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 RSPH10BP0C881 870 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 THPOP40225 353 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 ERVK-21P61565 698 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 SEMA3FQ13275 785 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 SART3Q15020 963 aaKnown RBP24.49■■□□□ 1.51
GGA2-204ENST00000563047 FAM117BQ6P1L5 589 aa24.49■■□□□ 1.51
GGA2-204ENST00000563047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.49■■□□□ 1.517e-11■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms