RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CEP55Q53EZ4 464 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 KRT40Q6A162 431 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 MOXD1Q6UVY6 613 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 ARRDC4Q8NCT1 418 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 OXER1Q8TDS5 423 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 PGBD1Q96JS3 809 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 MXRA8Q9BRK3 442 aa15.33■□□□□ 0.04
CDH1-204ENST00000562118 MOXD2PA6NHM9 499 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 FAM86B1E9PN63 330 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 FARP2O94887 1054 aaPredicted RBP15.32■□□□□ 0.04
CDH1-204ENST00000562118 PGK1P00558 417 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 TFRCP02786 760 aaKnown RBP15.32■□□□□ 0.04
CDH1-204ENST00000562118 FAM86B2P0C5J1 330 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 TXNP10599 105 aaKnown RBP15.32■□□□□ 0.04
CDH1-204ENST00000562118 PTGS1P23219 599 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 GJC2Q5T442 439 aaPredicted RBP15.32■□□□□ 0.04
CDH1-204ENST00000562118 C1orf53Q5VUE5 145 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 MYSM1Q5VVJ2 828 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 ANO1Q5XXA6 986 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 SEPT14Q6ZU15 432 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 KRT25Q7Z3Z0 450 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 RNF180Q86T96 592 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 DIS3LQ8TF46 1054 aaKnown RBP15.32■□□□□ 0.04
CDH1-204ENST00000562118 CDHR1Q96JP9 859 aa15.32■□□□□ 0.04
CDH1-204ENST00000562118 KRT2P35908 639 aa15.31■□□□□ 0.04
CDH1-204ENST00000562118 IRX5P78411 483 aaPredicted RBP15.31■□□□□ 0.04
CDH1-204ENST00000562118 LY6KQ17RY6 165 aa15.31■□□□□ 0.04
CDH1-204ENST00000562118 EARS2Q5JPH6 523 aaKnown RBP15.31■□□□□ 0.04
CDH1-204ENST00000562118 CELF3Q5SZQ8 465 aaKnown RBP15.31■□□□□ 0.04
CDH1-204ENST00000562118 PPTC7Q8NI37 304 aa15.31■□□□□ 0.04
CDH1-204ENST00000562118 CYP2W1Q8TAV3 490 aa15.31■□□□□ 0.04
CDH1-204ENST00000562118 COPS5Q92905 334 aa15.31■□□□□ 0.04
CDH1-204ENST00000562118 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.31■□□□□ 0.04
CDH1-204ENST00000562118 MRVI1Q9Y6F6 885 aa15.31■□□□□ 0.04
CDH1-204ENST00000562118 NFASCO94856 1347 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 GH1P01241 217 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 U2AF2P26368 475 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDH1-204ENST00000562118 MTMR1Q13613 665 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 FSCN1Q16658 493 aaKnown RBP15.3■□□□□ 0.04
CDH1-204ENST00000562118 Q4G0T1 1027 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 METTL7BQ6UX53 244 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 PCSK9Q8NBP7 692 aaKnown RBP15.3■□□□□ 0.04
CDH1-204ENST00000562118 TBCKQ8TEA7 893 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 PAWRQ96IZ0 340 aaKnown RBP15.3■□□□□ 0.04
CDH1-204ENST00000562118 C8orf76Q96K31 380 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 FOXP1Q9H334 677 aaPredicted RBP15.3■□□□□ 0.04
CDH1-204ENST00000562118 KCNH7Q9NS40 1196 aa15.3■□□□□ 0.04
CDH1-204ENST00000562118 ELP1O95163 1332 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 A0A1W2PQ45 241 aaPredicted RBP15.29■□□□□ 0.04
CDH1-204ENST00000562118 A0A1W2PQY0 241 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 BTBD18B2RXH4 712 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 ATP9AO75110 1047 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 MMP3P08254 477 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 GJB2P29033 226 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 CPT1AP50416 773 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 ACLYP53396 1101 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 SETQ01105 290 aaPredicted RBP15.29■□□□□ 0.04
CDH1-204ENST00000562118 NR5A1Q13285 461 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 LAMC2Q13753 1193 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 NEDD9Q14511 834 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 NONOQ15233 471 aaKnown RBP eCLIP15.29■□□□□ 0.04
CDH1-204ENST00000562118 KCNA10Q16322 511 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 PPP4R3AQ6IN85 833 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 NECAB2Q7Z6G3 386 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 DIS3L2Q8IYB7 885 aaKnown RBP15.29■□□□□ 0.04
CDH1-204ENST00000562118 SLC43A3Q8NBI5 491 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 OR6J1Q8NGC5 347 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 ZFP91Q96JP5 570 aaPredicted RBP15.29■□□□□ 0.04
CDH1-204ENST00000562118 C11orf49Q9H6J7 331 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 SPC25Q9HBM1 224 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 AGO4Q9HCK5 861 aaKnown RBP15.29■□□□□ 0.04
CDH1-204ENST00000562118 RTEL1Q9NZ71 1219 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 KIF3AQ9Y496 699 aa15.29■□□□□ 0.04
CDH1-204ENST00000562118 KBTBD13C9JR72 458 aa15.28■□□□□ 0.04
CDH1-204ENST00000562118 DHX15O43143 795 aaKnown RBP15.28■□□□□ 0.04
CDH1-204ENST00000562118 DYNC1LI2O43237 492 aaPredicted RBP15.28■□□□□ 0.04
CDH1-204ENST00000562118 GGPS1O95749 300 aa15.28■□□□□ 0.04
CDH1-204ENST00000562118 ASGR1P07306 291 aa15.28■□□□□ 0.04
CDH1-204ENST00000562118 C6orf222P0C671 652 aaPredicted RBP15.28■□□□□ 0.04
CDH1-204ENST00000562118 PURAQ00577 322 aaKnown RBP15.28■□□□□ 0.04
CDH1-204ENST00000562118 ITGB3BPQ13352 177 aaPredicted RBP15.28■□□□□ 0.04
CDH1-204ENST00000562118 GIMAP8Q8ND71 665 aaPredicted RBP15.28■□□□□ 0.04
CDH1-204ENST00000562118 AP5M1Q9H0R1 490 aa15.28■□□□□ 0.04
CDH1-204ENST00000562118 BCAS3Q9H6U6 928 aa15.28■□□□□ 0.04
CDH1-204ENST00000562118 BRMS1Q9HCU9 246 aa15.28■□□□□ 0.04
CDH1-204ENST00000562118 MYH15Q9Y2K3 1946 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 LTBP2Q14767 1821 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 FAM205CA6NFA0 338 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 KPNA6O60684 536 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 CABYRO75952 493 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 ARP10275 920 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 GCFC2P16383 781 aaKnown RBP15.27■□□□□ 0.04
CDH1-204ENST00000562118 BEX3Q00994 111 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 TRIM29Q14134 588 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 HSDL1Q3SXM5 330 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 GNASQ5JWF2 1037 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 B3GNT9Q6UX72 402 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 NEK8Q86SG6 692 aa15.27■□□□□ 0.04
CDH1-204ENST00000562118 FAM184AQ8NB25 1140 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms