RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 STAM2O75886 525 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 CYP2C8P10632 490 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 FCER1AP12319 257 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 ERCC3P19447 782 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 CCND2P30279 289 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 CIITAP33076 1130 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 SETQ01105 290 aaPredicted RBP7.27□□□□□ -1.25
SPG11-221ENST00000560299 FAM160A1Q05DH4 1040 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 BAATQ14032 418 aaPredicted RBP7.27□□□□□ -1.25
SPG11-221ENST00000560299 PDIA5Q14554 519 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 KCTD2Q14681 263 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 Q4G0T1 1027 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 WDR78Q5VTH9 848 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 OTOP1Q7RTM1 612 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 NLRX1Q86UT6 975 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 MSL3Q8N5Y2 521 aaKnown RBP7.27□□□□□ -1.25
SPG11-221ENST00000560299 FSIP1Q8NA03 581 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 SYTL5Q8TDW5 730 aaPredicted RBP7.27□□□□□ -1.25
SPG11-221ENST00000560299 TBC1D5Q92609 795 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 USP6NLQ92738 828 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 AK8Q96MA6 479 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 FAM20AQ96MK3 541 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 IWS1Q96ST2 819 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 MOV10L1Q9BXT6 1211 aaKnown RBP7.27□□□□□ -1.25
SPG11-221ENST00000560299 DDX19AQ9NUU7 478 aaKnown RBP7.27□□□□□ -1.25
SPG11-221ENST00000560299 CYP39A1Q9NYL5 469 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 BTBD7Q9P203 1132 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 SRRDQ9UH36 339 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 NRBP1Q9UHY1 535 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 HOOK1Q9UJC3 728 aaKnown RBP7.27□□□□□ -1.25
SPG11-221ENST00000560299 DIS3Q9Y2L1 958 aaKnown RBP7.27□□□□□ -1.25
SPG11-221ENST00000560299 PTPN22Q9Y2R2 807 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 RIPK3Q9Y572 518 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 IVNS1ABPQ9Y6Y0 642 aa7.27□□□□□ -1.25
SPG11-221ENST00000560299 RBBP6Q7Z6E9 1792 aaKnown RBP7.26□□□□□ -1.25
SPG11-221ENST00000560299 CTAGE5O15320 804 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 MAFGO15525 162 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 CNMDO75829 334 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 TDP2O95551 362 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 TAL1P17542 331 aaPredicted RBP7.26□□□□□ -1.25
SPG11-221ENST00000560299 UBA7P41226 1012 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 TXKP42681 527 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 SYKP43405 635 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 CEP55Q53EZ4 464 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 PRR16Q569H4 304 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 AXDND1Q5T1B0 1012 aaPredicted RBP7.26□□□□□ -1.25
SPG11-221ENST00000560299 CCDC183Q5T5S1 534 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 COL13A1Q5TAT6 717 aaPredicted RBP7.26□□□□□ -1.25
SPG11-221ENST00000560299 RESP18Q5W5W9 173 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 PCNX4Q63HM2 1172 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 KANK3Q6NY19 840 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 CAVIN1Q6NZI2 390 aaKnown RBP7.26□□□□□ -1.25
SPG11-221ENST00000560299 POTEEQ6S8J3 1075 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 NIPA1Q7RTP0 329 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 ZNF467Q7Z7K2 595 aaPredicted RBP7.26□□□□□ -1.25
SPG11-221ENST00000560299 PLA2G4DQ86XP0 818 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 ANKRD13CQ8N6S4 541 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 C4orf32Q8N8J7 132 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 RASSF8Q8NHQ8 419 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 GPT2Q8TD30 523 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 CRYGNQ8WXF5 182 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 CDHR1Q96JP9 859 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 MBOAT7Q96N66 472 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 HS3ST6Q96QI5 342 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 TAAR1Q96RJ0 339 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 MMP19Q99542 508 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 MXRA8Q9BRK3 442 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 SDF4Q9BRK5 362 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 CSRNP2Q9H175 543 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 A1CFQ9NQ94 594 aaKnown RBP7.26□□□□□ -1.25
SPG11-221ENST00000560299 PXMP2Q9NR77 195 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 SLC5A4Q9NY91 659 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 CCDC39Q9UFE4 941 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 USP25Q9UHP3 1055 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 TCEAL9Q9UHQ7 104 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 FBXO2Q9UK22 296 aaPredicted RBP7.26□□□□□ -1.25
SPG11-221ENST00000560299 GJD2Q9UKL4 321 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 KCNH3Q9ULD8 1083 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 PCDHA12Q9UN75 941 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 RPTORQ8N122 1335 aa7.26□□□□□ -1.25
SPG11-221ENST00000560299 A0A1B0GVL5 298 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 SLC15A5A6NIM6 579 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 ASB14A6NK59 587 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 SLC26A4O43511 780 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 SLC37A4O43826 429 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 ZNF202O95125 648 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 NR3C2P08235 984 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 MYCLP12524 364 aaPredicted RBP7.25□□□□□ -1.25
SPG11-221ENST00000560299 EIF2AK2P19525 551 aaKnown RBP7.25□□□□□ -1.25
SPG11-221ENST00000560299 TECP42680 631 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 PSMC4P43686 418 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 RGS19P49795 217 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 NUBP1P53384 320 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 GRB14Q14449 540 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 PGM5Q15124 567 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 ZRSR1Q15695 479 aaKnown RBP7.25□□□□□ -1.25
SPG11-221ENST00000560299 STXBP2Q15833 593 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 Q3C1V9 767 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 GNPTABQ3T906 1256 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 MORN1Q5T089 497 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms