RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 CMTR1Q8N1G2 835 aaKnown RBP22.05■■□□□ 1.12
KNSTRN-208ENST00000559604 RETREG2Q8NC44 543 aa22.05■■□□□ 1.12
KNSTRN-208ENST00000559604 LZTS2Q9BRK4 669 aa22.05■■□□□ 1.12
KNSTRN-208ENST00000559604 LRRC2Q9BYS8 371 aa22.05■■□□□ 1.12
KNSTRN-208ENST00000559604 HDAC6Q9UBN7 1215 aa22.05■■□□□ 1.12
KNSTRN-208ENST00000559604 SLC4A7Q9Y6M7 1214 aa22.05■■□□□ 1.12
KNSTRN-208ENST00000559604 DOCK5Q9H7D0 1870 aa22.05■■□□□ 1.12
KNSTRN-208ENST00000559604 ZBBXA8MT70 800 aa22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 HAS3O00219 553 aa22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 GNAQP50148 359 aa22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 MRPS9P82933 396 aaKnown RBP22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 SPATA33Q96N06 139 aa22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 ALG1Q9BT22 464 aa22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 GTF2IRD1Q9UHL9 959 aa22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 MSRAQ9UJ68 235 aa22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 YBX2Q9Y2T7 364 aaKnown RBP22.04■■□□□ 1.12
KNSTRN-208ENST00000559604 PPFIA4O75335 1185 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 MFSD10Q14728 455 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 KIAA0753Q2KHM9 967 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 USP17L6PQ6QN14 398 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 RAB11FIP4Q86YS3 637 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 C7orf31Q8N865 590 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 DHX38Q92620 1227 aaKnown RBP22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 KATNAL1Q9BW62 490 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 NKX2-4Q9H2Z4 354 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 BCAS3Q9H6U6 928 aa22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 SEC63Q9UGP8 760 aaKnown RBP22.03■■□□□ 1.12
KNSTRN-208ENST00000559604 CHD7Q9P2D1 2997 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 PIK3CDO00329 1044 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 MEIS2O14770 477 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 CALM1P0DP23 149 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 CALM2P0DP24 149 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 CALM3P0DP25 149 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 RABGGTBP53611 331 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 SGMS1Q86VZ5 419 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 CAGE1Q8TC20 777 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 INPP4AQ96PE3 977 aaPredicted RBP22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 SLC12A7Q9Y666 1083 aa22.02■■□□□ 1.12
KNSTRN-208ENST00000559604 STAM2O75886 525 aa22.01■■□□□ 1.11
KNSTRN-208ENST00000559604 ICAM3P32942 547 aa22.01■■□□□ 1.11
KNSTRN-208ENST00000559604 SEMA3FQ13275 785 aa22.01■■□□□ 1.11
KNSTRN-208ENST00000559604 CCDC155Q8N6L0 562 aa22.01■■□□□ 1.11
KNSTRN-208ENST00000559604 SMARCC2Q8TAQ2 1214 aa22.01■■□□□ 1.11
KNSTRN-208ENST00000559604 AFAP1L1Q8TED9 768 aa22.01■■□□□ 1.11
KNSTRN-208ENST00000559604 C16orf70Q9BSU1 422 aa22.01■■□□□ 1.11
KNSTRN-208ENST00000559604 MLXIPQ9HAP2 919 aa22.01■■□□□ 1.11
KNSTRN-208ENST00000559604 ACTN1P12814 892 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 ATP2A2P16615 1042 aaKnown RBP22■■□□□ 1.11
KNSTRN-208ENST00000559604 RBL2Q08999 1139 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 GPNMBQ14956 572 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 GNPTABQ3T906 1256 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 RNF20Q5VTR2 975 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 TMTC3Q6ZXV5 915 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 FANCBQ8NB91 859 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 CUL5Q93034 780 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 PRDM12Q9H4Q4 367 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 RTEL1Q9NZ71 1219 aa22■■□□□ 1.11
KNSTRN-208ENST00000559604 hCG_1642624A0A1W2PR95 340 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 SPATA31C2B4DYI2 1134 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 CDC45O75419 566 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 MYOGP15173 224 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 SELPP16109 830 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 HIC1Q14526 733 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 PCNX4Q63HM2 1172 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 MICU3Q86XE3 530 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 RASEFQ8IZ41 740 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 NEK1Q96PY6 1258 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 FTOQ9C0B1 505 aaKnown RBP eCLIP21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 SLC28A3Q9HAS3 691 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 PCDHA11Q9Y5I1 949 aa21.99■■□□□ 1.11
KNSTRN-208ENST00000559604 PTPRSQ13332 1948 aa21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 ZNF200P98182 395 aaPredicted RBP21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 EXOSC10Q01780 885 aaKnown RBP21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 TRIM71Q2Q1W2 868 aaKnown RBP21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 TSGA10IPQ3SY00 556 aa21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 LRRC8DQ7L1W4 858 aa21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 CCDC82Q8N4S0 544 aa21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 WNT8BQ93098 351 aa21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 TCEANC2Q96MN5 208 aa21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 VCANP13611 3396 aa21.98■■□□□ 1.11
KNSTRN-208ENST00000559604 FIBPO43427 364 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 CKBP12277 381 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 PTK7Q13308 1070 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 NEDD9Q14511 834 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 ADCK5Q3MIX3 580 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 XRRA1Q6P2D8 792 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 APOA5Q6Q788 366 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 METTL7BQ6UX53 244 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 CYFIP1Q7L576 1253 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 USP38Q8NB14 1042 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 GAS2L1Q99501 681 aaPredicted RBP21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 PSTPIP2Q9H939 334 aa21.97■■□□□ 1.11
KNSTRN-208ENST00000559604 H3BRB1 525 aa21.96■■□□□ 1.11
KNSTRN-208ENST00000559604 LGALS2P05162 132 aa21.96■■□□□ 1.11
KNSTRN-208ENST00000559604 ADGRE1Q14246 886 aa21.96■■□□□ 1.11
KNSTRN-208ENST00000559604 TRAF7Q6Q0C0 670 aa21.96■■□□□ 1.11
KNSTRN-208ENST00000559604 DHX32Q7L7V1 743 aaKnown RBP21.96■■□□□ 1.11
KNSTRN-208ENST00000559604 SLC9A7Q96T83 725 aa21.96■■□□□ 1.11
KNSTRN-208ENST00000559604 TUT1Q9H6E5 874 aaKnown RBP21.96■■□□□ 1.11
KNSTRN-208ENST00000559604 BRPF3Q9ULD4 1205 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms