RNA–Protein interactions for RNA: ENST00000559083.1

KNSTRN-205, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 405 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-205ENST00000559083 NKX3-2P78367 333 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 TNFAIP2Q03169 654 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 BRDTQ58F21 947 aaPredicted RBP11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 TTC38Q5R3I4 469 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 MYSM1Q5VVJ2 828 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 PLA2G4DQ86XP0 818 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 FBXO16Q8IX29 292 aaPredicted RBP11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 ZNF333Q96JL9 665 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 ZNF396Q96N95 335 aaPredicted RBP11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 RIT2Q99578 217 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 WDR11Q9BZH6 1224 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 SPC25Q9HBM1 224 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 KCNH7Q9NS40 1196 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 TCEAL9Q9UHQ7 104 aa11.21□□□□□ -0.61
KNSTRN-205ENST00000559083 IPO5O00410 1097 aaKnown RBP11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 NEMFO60524 1076 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 GH1P01241 217 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 TXNP10599 105 aaKnown RBP11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 RARBP10826 455 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 PRPHP41219 470 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 LAMC2Q13753 1193 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 PRR16Q569H4 304 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 EARS2Q5JPH6 523 aaKnown RBP11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 ARL6IP4Q66PJ3 421 aaKnown RBP11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 METTL7BQ6UX53 244 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 SEPT14Q6ZU15 432 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 EEPD1Q7L9B9 569 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 FERMT3Q86UX7 667 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 SH3TC2Q8TF17 1288 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 LENG9Q96B70 501 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 SDF4Q9BRK5 362 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 MCOLN1Q9GZU1 580 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 KCNMB3Q9NPA1 279 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 PAK6Q9NQU5 681 aaPredicted RBP11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 RTEL1Q9NZ71 1219 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 CHMP5Q9NZZ3 219 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 DDX20Q9UHI6 824 aaKnown RBP11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 DDX41Q9UJV9 622 aaKnown RBP11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
KNSTRN-205ENST00000559083 EDIL3O43854 480 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 MARCH6O60337 910 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 KPNA6O60684 536 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 TDP2O95551 362 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 CNGA1P29973 690 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 ADCYAP1R1P41586 468 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 KRT76Q01546 638 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 DHX37Q8IY37 1157 aaKnown RBP11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 RDM1Q8NG50 284 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 SLC5A5Q92911 643 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 ZNF577Q9BSK1 485 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 RAB34Q9BZG1 259 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 AP5M1Q9H0R1 490 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 AGO4Q9HCK5 861 aaKnown RBP11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 POLR3EQ9NVU0 708 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 GNEQ9Y223 722 aaKnown RBP11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
KNSTRN-205ENST00000559083 FAM205CA6NFA0 338 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 ZEB2O60315 1214 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 GJB1P08034 283 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 CCL5P13501 91 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 KCNA2P16389 499 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 UBA1P22314 1058 aaKnown RBP11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 SFNP31947 248 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 MCM7P33993 719 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 CPT1AP50416 773 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 TOB1P50616 345 aaPredicted RBP11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 GJA9P57773 515 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 TRIM32Q13049 653 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 CALCRLQ16602 461 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 PRAMEF19Q5SWL8 479 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 CELF3Q5SZQ8 465 aaKnown RBP11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 ZNF746Q6NUN9 644 aaPredicted RBP11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 RNF180Q86T96 592 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 SMAP1Q8IYB5 467 aaPredicted RBP11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 ARRDC4Q8NCT1 418 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 TRPV1Q8NER1 839 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 CYP2W1Q8TAV3 490 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 ETNPPLQ8TBG4 499 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 TMEM106CQ9BVX2 250 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 RNF208Q9H0X6 261 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 UPF3AQ9H1J1 476 aaKnown RBP11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 MLXIPQ9HAP2 919 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 JPH1Q9HDC5 661 aaPredicted RBP11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 PDGFCQ9NRA1 345 aa11.18□□□□□ -0.62
KNSTRN-205ENST00000559083 KIAA1217Q5T5P2 1943 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 HTTP42858 3142 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 A6NJR5 290 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 MSH4O15457 936 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 SLC37A4O43826 429 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 GAS7O60861 476 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 PPFIA4O75335 1185 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 PSMD10O75832 226 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 FARP2O94887 1054 aaPredicted RBP11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 YEATS4O95619 227 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 GGPS1O95749 300 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 OR52Z1P0C646 297 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 ARP10275 920 aa11.17□□□□□ -0.62
KNSTRN-205ENST00000559083 SMPD1P17405 629 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms