RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 COL6A1P12109 1028 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 NECTIN1Q15223 517 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 RNF20Q5VTR2 975 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 CREB3L3Q68CJ9 461 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 NECAB2Q7Z6G3 386 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 TRIM50Q86XT4 487 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 STAG2Q8N3U4 1231 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 MSL3Q8N5Y2 521 aaKnown RBP7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 HTATIP2Q9BUP3 242 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 C11orf49Q9H6J7 331 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 CYP39A1Q9NYL5 469 aa7.02□□□□□ -1.28
CTDSPL2-204ENST00000558966 CENPBP07199 599 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 PARP1P09874 1014 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 CDC37Q16543 378 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 SLC35G1Q2M3R5 365 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 PHLDB3Q6NSJ2 640 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 PPP1R18Q6NYC8 613 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 NSMFQ6X4W1 530 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 ADGRF4Q8IZF3 695 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 IGDCC4Q8TDY8 1250 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 CLEC4DQ8WXI8 215 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 DPF3Q92784 378 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 LENG1Q96BZ8 264 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 PURBQ96QR8 312 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 KCTD15Q96SI1 283 aaPredicted RBP7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 KATNBL1Q9H079 304 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 LY9Q9HBG7 655 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 MAD2L2Q9UI95 211 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 CNPY2Q9Y2B0 182 aa7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 DDX49Q9Y6V7 483 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-204ENST00000558966 H0YGN5 161 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 DNM1LO00429 736 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 ADCY6O43306 1168 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 PRC1O43663 620 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 GGCXP38435 758 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 ATP1A2P50993 1020 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 TROAPQ12815 778 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 BAATQ14032 418 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 GRM4Q14833 912 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 WTAPQ15007 396 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 SART3Q15020 963 aaKnown RBP7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 QRICH1Q2TAL8 776 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 TMEM67Q5HYA8 995 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 ERICH6BQ5W0A0 696 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 SLC30A10Q6XR72 485 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 ARMCX2Q7L311 632 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 CCDC144CPQ8IYA2 1237 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 JMJD4Q9H9V9 463 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 PPP4R2Q9NY27 417 aa7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 ZHX1Q9UKY1 873 aaPredicted RBP7.01□□□□□ -1.29
CTDSPL2-204ENST00000558966 ERICH2A1L162 156 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 KLRF2D3W0D1 207 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 SH2B2O14492 632 aaPredicted RBP7□□□□□ -1.29
CTDSPL2-204ENST00000558966 LGR5O75473 907 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 AKR1A1P14550 325 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 MCM5P33992 734 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ACVR2BQ13705 512 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 LRRC41Q15345 812 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 USH1GQ495M9 461 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 GJC2Q5T442 439 aaPredicted RBP7□□□□□ -1.29
CTDSPL2-204ENST00000558966 CASC1Q6TDU7 716 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 MTMR8Q96EF0 704 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 MTA3Q9BTC8 594 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ABHD16BQ9H3Z7 469 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 LAMA3Q16787 3333 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 PTPDC1A2A3K4 754 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ASB14A6NK59 587 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 CYTH3O43739 400 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 DHX16O60231 1041 aaKnown RBP7□□□□□ -1.29
CTDSPL2-204ENST00000558966 PPP1R11O60927 126 aaPredicted RBP7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ADAMTS4O75173 837 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 DKK1O94907 266 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 PGK1P00558 417 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 RARBP10826 455 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 RPS6P62753 249 aaKnown RBP7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ARID5BQ14865 1188 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 LRRC26Q2I0M4 334 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ADCK5Q3MIX3 580 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 CCDC144BQ3MJ40 725 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 VASH1Q7L8A9 365 aaPredicted RBP7□□□□□ -1.29
CTDSPL2-204ENST00000558966 SPNS2Q8IVW8 549 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ZNF654Q8IZM8 581 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ARRDC4Q8NCT1 418 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 TPCN2Q8NHX9 752 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 TMEM87BQ96K49 555 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 MYL10Q9BUA6 226 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 LRRC2Q9BYS8 371 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 VAT1LQ9HCJ6 419 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 XPNPEP3Q9NQH7 507 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 EIF4ENIF1Q9NRA8 985 aaKnown RBP7□□□□□ -1.29
CTDSPL2-204ENST00000558966 PNMA2Q9UL42 364 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 FAM184BQ9ULE4 1060 aa7□□□□□ -1.29
CTDSPL2-204ENST00000558966 ABCB11O95342 1321 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 SYNRGQ9UMZ2 1314 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 MYADML2A6NDP7 307 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 SFI1A8K8P3 1242 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 KBTBD13C9JR72 458 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 OPLAHO14841 1288 aa6.99□□□□□ -1.29
CTDSPL2-204ENST00000558966 VARSP26640 1264 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms