RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 DDX25Q9UHL0 483 aaKnown RBP10.95□□□□□ -0.66
TRPM1-207ENST00000558445 ADGRL2O95490 1459 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 TMEM221A6NGB7 291 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 O00370 1275 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 KRT75O95678 551 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 APOEP02649 317 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 CXCR5P32302 372 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 MAGEA1P43355 309 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 PTDSS1P48651 473 aaKnown RBP10.95□□□□□ -0.66
TRPM1-207ENST00000558445 TUBA4AP68366 448 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 SLC39A14Q15043 492 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 PPP1R42Q7Z4L9 355 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 CROCCP3Q8IVE0 287 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 STAG2Q8N3U4 1231 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 MREGQ8N565 214 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 DDHD1Q8NEL9 900 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 SPATA16Q9BXB7 569 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 TBC1D23Q9NUY8 699 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 MATN2O00339 956 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 TJP3O95049 919 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 PYGMP11217 842 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 VAV1P15498 845 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 ZBTB16Q05516 673 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 LIN52Q52LA3 116 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 CAPN12Q6ZSI9 719 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 DEPTORQ8TB45 409 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
TRPM1-207ENST00000558445 AFF2P51816 1311 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 ITIH6Q6UXX5 1313 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 SMIM31A0A1B0GVY4 71 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 KRT4P19013 534 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 AFMP43652 599 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 CCNG1P51959 295 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 EZH2Q15910 746 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 CMPK2Q5EBM0 449 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 MAP3K21Q5TCX8 1036 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 MARK2Q7KZI7 788 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 SKA1Q96BD8 255 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 FHDC1Q9C0D6 1143 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 LAMC1P11047 1609 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 TPPPO94811 219 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 IGHMBP2P38935 993 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 COPB1P53618 953 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 RNASE9P60153 205 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 KIF22Q14807 665 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 PDCD4Q53EL6 469 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 LRRC8BQ6P9F7 803 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 CENPTQ96BT3 561 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 Q9H521 79 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 TRIM10Q9UDY6 481 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 ZC3H4Q9UPT8 1303 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 BAG2O95816 211 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 IRX4P78413 519 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 RASSF7Q02833 373 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 PPARAQ07869 468 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 SNX30Q5VWJ9 437 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 ENAHQ8N8S7 591 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 SLC17A8Q8NDX2 589 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 NELFBQ8WX92 580 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 FERMT2Q96AC1 680 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 OXCT2Q9BYC2 517 aaPredicted RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 ABCF3Q9NUQ8 709 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 TBCCD1Q9NVR7 557 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 SEL1LQ9UBV2 794 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 CTNND2Q9UQB3 1225 aa10.94□□□□□ -0.66
TRPM1-207ENST00000558445 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.94□□□□□ -0.66
TRPM1-207ENST00000558445 GOLGA8BA8MQT2 603 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 WDR46O15213 610 aaKnown RBP10.93□□□□□ -0.66
TRPM1-207ENST00000558445 MAPK13O15264 365 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 POLR2DO15514 142 aaKnown RBP10.93□□□□□ -0.66
TRPM1-207ENST00000558445 DCTN3O75935 186 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 EEF2P13639 858 aaKnown RBP10.93□□□□□ -0.66
TRPM1-207ENST00000558445 FXR1P51114 621 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRPM1-207ENST00000558445 TOB2Q14106 344 aaPredicted RBP10.93□□□□□ -0.66
TRPM1-207ENST00000558445 EMC10Q5UCC4 262 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 HAUS3Q68CZ6 603 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 CCDC68Q9H2F9 335 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 ATP10DQ9P241 1426 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 PNMA6EA0A0J9YXQ4 647 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 STRNO43815 780 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 ALADP13716 330 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 ETS2P15036 469 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 MTIF2P46199 727 aaKnown RBP10.93□□□□□ -0.66
TRPM1-207ENST00000558445 GALK1P51570 392 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 FOXD4Q12950 439 aaPredicted RBP10.93□□□□□ -0.66
TRPM1-207ENST00000558445 DDB1Q16531 1140 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 FADS3Q9Y5Q0 445 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 A0A1W2PRG0 241 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 PPP6R2O75170 966 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 HSPA8P11142 646 aaKnown RBP10.93□□□□□ -0.66
TRPM1-207ENST00000558445 NDUFA5Q16718 116 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 OTUD7BQ6GQQ9 843 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 LMOD2Q6P5Q4 547 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 CCDC62Q6P9F0 684 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 ZNF449Q6P9G9 518 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 B3GNT6Q6ZMB0 384 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 CCNJLQ8IV13 435 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 ANKRD42Q8N9B4 389 aa10.93□□□□□ -0.66
TRPM1-207ENST00000558445 DHTKD1Q96HY7 919 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms