RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
TRPM1-207ENST00000558445 MYT1Q01538 1121 aa17.69■□□□□ 0.42
TRPM1-207ENST00000558445 TTBK1Q5TCY1 1321 aaPredicted RBP16.71■□□□□ 0.26
TRPM1-207ENST00000558445 HRCP23327 699 aa16.68■□□□□ 0.26
TRPM1-207ENST00000558445 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
TRPM1-207ENST00000558445 PPARGC1BQ86YN6 1023 aaKnown RBP16.12■□□□□ 0.17
TRPM1-207ENST00000558445 ERICH6Q7L0X2 663 aa16.05■□□□□ 0.16
TRPM1-207ENST00000558445 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
TRPM1-207ENST00000558445 CENPBP07199 599 aaPredicted RBP16.02■□□□□ 0.16
TRPM1-207ENST00000558445 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
TRPM1-207ENST00000558445 BCL11AQ9H165 835 aa15.8■□□□□ 0.12
TRPM1-207ENST00000558445 ACIN1Q9UKV3 1341 aaKnown RBP15.71■□□□□ 0.11
TRPM1-207ENST00000558445 GTF3C3Q9Y5Q9 886 aa15.68■□□□□ 0.1
TRPM1-207ENST00000558445 PRKCSHP14314 528 aaPredicted RBP15.66■□□□□ 0.1
TRPM1-207ENST00000558445 NEUROD1Q13562 356 aa15.44■□□□□ 0.06
TRPM1-207ENST00000558445 TRIM26Q12899 539 aaPredicted RBP15.43■□□□□ 0.06
TRPM1-207ENST00000558445 NISCHQ9Y2I1 1504 aa15.42■□□□□ 0.06
TRPM1-207ENST00000558445 FAM9AQ8IZU1 332 aaPredicted RBP15.4■□□□□ 0.06
TRPM1-207ENST00000558445 ANP32EQ9BTT0 268 aa15.36■□□□□ 0.05
TRPM1-207ENST00000558445 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
TRPM1-207ENST00000558445 APLP2Q06481 763 aa15.19■□□□□ 0.02
TRPM1-207ENST00000558445 YTHDC1Q96MU7 727 aaKnown RBP15.17■□□□□ 0.02
TRPM1-207ENST00000558445 DIEXFQ68CQ4 756 aaKnown RBP15.15■□□□□ 0.02
TRPM1-207ENST00000558445 DCAF1Q9Y4B6 1507 aa15.05■□□□□ -0
TRPM1-207ENST00000558445 CSRNP3Q8WYN3 585 aa15.02□□□□□ -0.01
TRPM1-207ENST00000558445 SLC24A1O60721 1099 aa15.01□□□□□ -0.01
TRPM1-207ENST00000558445 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
TRPM1-207ENST00000558445 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
TRPM1-207ENST00000558445 CHIC1Q5VXU3 224 aa14.95□□□□□ -0.02
TRPM1-207ENST00000558445 MYT1LQ9UL68 1186 aa14.92□□□□□ -0.02
TRPM1-207ENST00000558445 CCDC180Q9P1Z9 1646 aa14.88□□□□□ -0.03
TRPM1-207ENST00000558445 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
TRPM1-207ENST00000558445 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
TRPM1-207ENST00000558445 MYO15BQ96JP2 1530 aa14.76□□□□□ -0.05
TRPM1-207ENST00000558445 LOC105371045A0A1W2PR82 267 aa14.72□□□□□ -0.05
TRPM1-207ENST00000558445 NEFLP07196 543 aa14.71□□□□□ -0.06
TRPM1-207ENST00000558445 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
TRPM1-207ENST00000558445 ZNF316A6NFI3 1004 aaPredicted RBP14.64□□□□□ -0.07
TRPM1-207ENST00000558445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.62□□□□□ -0.07
TRPM1-207ENST00000558445 ANO8Q9HCE9 1232 aaPredicted RBP14.61□□□□□ -0.07
TRPM1-207ENST00000558445 ERICH6BQ5W0A0 696 aa14.59□□□□□ -0.07
TRPM1-207ENST00000558445 SUPT16HQ9Y5B9 1047 aaKnown RBP14.58□□□□□ -0.07
TRPM1-207ENST00000558445 RTL5Q5HYW3 569 aaPredicted RBP14.56□□□□□ -0.08
TRPM1-207ENST00000558445 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
TRPM1-207ENST00000558445 GLIPR1L2Q4G1C9 344 aa14.55□□□□□ -0.08
TRPM1-207ENST00000558445 UBE2Q2Q8WVN8 375 aa14.53□□□□□ -0.08
TRPM1-207ENST00000558445 BCANQ96GW7 911 aa14.5□□□□□ -0.09
TRPM1-207ENST00000558445 DEKP35659 375 aaKnown RBP14.5□□□□□ -0.09
TRPM1-207ENST00000558445 MIER1Q8N108 512 aa14.44□□□□□ -0.1
TRPM1-207ENST00000558445 CCDC136Q96JN2 1154 aa14.43□□□□□ -0.1
TRPM1-207ENST00000558445 PKNOX2Q96KN3 472 aa14.42□□□□□ -0.1
TRPM1-207ENST00000558445 TRIM41Q8WV44 630 aa14.41□□□□□ -0.1
TRPM1-207ENST00000558445 RBM19Q9Y4C8 960 aaKnown RBP14.4□□□□□ -0.1
TRPM1-207ENST00000558445 CDK11AQ9UQ88 783 aaPredicted RBP14.36□□□□□ -0.11
TRPM1-207ENST00000558445 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
TRPM1-207ENST00000558445 PODXL2Q9NZ53 605 aa14.36□□□□□ -0.11
TRPM1-207ENST00000558445 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.33□□□□□ -0.11
TRPM1-207ENST00000558445 FKBP8Q14318 412 aa14.32□□□□□ -0.12
TRPM1-207ENST00000558445 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
TRPM1-207ENST00000558445 RTN4Q9NQC3 1192 aaKnown RBP14.26□□□□□ -0.13
TRPM1-207ENST00000558445 NBR1Q14596 966 aa14.25□□□□□ -0.13
TRPM1-207ENST00000558445 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.14
TRPM1-207ENST00000558445 ITGAEP38570 1179 aa14.1□□□□□ -0.15
TRPM1-207ENST00000558445 PLEKHG5O94827 1062 aa14.09□□□□□ -0.15
TRPM1-207ENST00000558445 ANP32AP39687 249 aaKnown RBP14.07□□□□□ -0.16
TRPM1-207ENST00000558445 NOP58Q9Y2X3 529 aaKnown RBP14.07□□□□□ -0.16
TRPM1-207ENST00000558445 VSIG10Q8N0Z9 540 aa14.01□□□□□ -0.17
TRPM1-207ENST00000558445 MSH5O43196 834 aa14□□□□□ -0.17
TRPM1-207ENST00000558445 RSPH6AQ9H0K4 717 aa14□□□□□ -0.17
TRPM1-207ENST00000558445 ZBTB47Q9UFB7 747 aaPredicted RBP13.99□□□□□ -0.17
TRPM1-207ENST00000558445 IL27Q8NEV9 243 aa13.97□□□□□ -0.17
TRPM1-207ENST00000558445 RANGAP1P46060 587 aaPredicted RBP13.95□□□□□ -0.18
TRPM1-207ENST00000558445 NEFMP07197 916 aa13.92□□□□□ -0.18
TRPM1-207ENST00000558445 A0A0U1RQG5 324 aaPredicted RBP13.87□□□□□ -0.19
TRPM1-207ENST00000558445 DCAF8L2P0C7V8 631 aa13.86□□□□□ -0.19
TRPM1-207ENST00000558445 TIMELESSQ9UNS1 1208 aa13.86□□□□□ -0.19
TRPM1-207ENST00000558445 HNRNPUL2Q1KMD3 747 aaKnown RBP13.84□□□□□ -0.19
TRPM1-207ENST00000558445 ZMYND15Q9H091 742 aa13.82□□□□□ -0.2
TRPM1-207ENST00000558445 PDE4CQ08493 712 aa13.81□□□□□ -0.2
TRPM1-207ENST00000558445 PPM1GO15355 546 aaPredicted RBP13.79□□□□□ -0.2
TRPM1-207ENST00000558445 HSP90AA2PQ14568 343 aaPredicted RBP13.77□□□□□ -0.21
TRPM1-207ENST00000558445 USP35Q9P2H5 1018 aa13.76□□□□□ -0.21
TRPM1-207ENST00000558445 ANP32CO43423 234 aa13.73□□□□□ -0.21
TRPM1-207ENST00000558445 HSP90AA1P07900 732 aaKnown RBP13.73□□□□□ -0.21
TRPM1-207ENST00000558445 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
TRPM1-207ENST00000558445 NAP1L5Q96NT1 182 aaPredicted RBP13.72□□□□□ -0.21
TRPM1-207ENST00000558445 PPP4R2Q9NY27 417 aa13.72□□□□□ -0.21
TRPM1-207ENST00000558445 IPO9Q96P70 1041 aaKnown RBP13.7□□□□□ -0.22
TRPM1-207ENST00000558445 NPM2Q86SE8 214 aaKnown RBP13.68□□□□□ -0.22
TRPM1-207ENST00000558445 IRX6P78412 446 aaPredicted RBP13.68□□□□□ -0.22
TRPM1-207ENST00000558445 PDIA4P13667 645 aaKnown RBP13.66□□□□□ -0.22
TRPM1-207ENST00000558445 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
TRPM1-207ENST00000558445 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
TRPM1-207ENST00000558445 C11orf95C9JLR9 678 aaPredicted RBP13.61□□□□□ -0.23
TRPM1-207ENST00000558445 NCLP19338 710 aaKnown RBP13.6□□□□□ -0.23
TRPM1-207ENST00000558445 RRP9O43818 475 aaKnown RBP13.6□□□□□ -0.23
TRPM1-207ENST00000558445 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
TRPM1-207ENST00000558445 FAM43AQ8N2R8 423 aa13.6□□□□□ -0.23
TRPM1-207ENST00000558445 GSE1Q14687 1217 aa13.59□□□□□ -0.23
TRPM1-207ENST00000558445 HNRNPUQ00839 825 aaKnown RBP eCLIP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms