RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 PTK7Q13308 1070 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 PGM5Q15124 567 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 CELF3Q5SZQ8 465 aaKnown RBP18.53■□□□□ 0.56
SCFD1-224ENST00000557713 KRT40Q6A162 431 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 CNKSR3Q6P9H4 555 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 RIOX1Q9H6W3 641 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 XIRP2A4UGR9 3374 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 PTPRSQ13332 1948 aa18.53■□□□□ 0.56
SCFD1-224ENST00000557713 CYP21A2P08686 494 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 TGFB3P10600 412 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 GSPT1P15170 499 aaKnown RBP18.52■□□□□ 0.56
SCFD1-224ENST00000557713 DEFB103AP81534 67 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 ZNF200P98182 395 aaPredicted RBP18.52■□□□□ 0.56
SCFD1-224ENST00000557713 HIC1Q14526 733 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 GRM4Q14833 912 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 HSDL1Q3SXM5 330 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 SPRED2Q7Z698 418 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 TMCO2Q7Z6W1 182 aaPredicted RBP18.52■□□□□ 0.56
SCFD1-224ENST00000557713 IL27Q8NEV9 243 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 IL31RAQ8NI17 732 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 WNT8BQ93098 351 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 PIGSQ96S52 555 aa18.52■□□□□ 0.56
SCFD1-224ENST00000557713 ABHD14A-ACY1A0A1B0GW23 586 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 LCHNA4D1U4 455 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 LPXNO60711 386 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 GGPS1O95749 300 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 TRDNQ13061 729 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 TRAF1Q13077 416 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 GRB10Q13322 594 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 AAK1Q2M2I8 961 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 ZNF618Q5T7W0 954 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 TTC22Q5TAA0 569 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
SCFD1-224ENST00000557713 SPATA33Q96N06 139 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 C16orf70Q9BSU1 422 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 SENP2Q9HC62 589 aa18.51■□□□□ 0.55
SCFD1-224ENST00000557713 GCOM1H8Y6P7 765 aaPredicted RBP18.5■□□□□ 0.55
SCFD1-224ENST00000557713 IFIT3O14879 490 aaKnown RBP18.5■□□□□ 0.55
SCFD1-224ENST00000557713 CYTH3O43739 400 aa18.5■□□□□ 0.55
SCFD1-224ENST00000557713 POLR2MP0CAP2 368 aa18.5■□□□□ 0.55
SCFD1-224ENST00000557713 KCNQ1P51787 676 aa18.5■□□□□ 0.55
SCFD1-224ENST00000557713 PTH1RQ03431 593 aa18.5■□□□□ 0.55
SCFD1-224ENST00000557713 TROAPQ12815 778 aa18.5■□□□□ 0.55
SCFD1-224ENST00000557713 MBTPS1Q14703 1052 aa18.5■□□□□ 0.55
SCFD1-224ENST00000557713 SKIV2LQ15477 1246 aaKnown RBP18.5■□□□□ 0.55
SCFD1-224ENST00000557713 HOMER1Q86YM7 354 aa18.5■□□□□ 0.55
SCFD1-224ENST00000557713 GPKOWQ92917 476 aaPredicted RBP eCLIP18.5■□□□□ 0.55
SCFD1-224ENST00000557713 ZFP91Q96JP5 570 aaPredicted RBP18.5■□□□□ 0.55
SCFD1-224ENST00000557713 ZBED2Q9BTP6 218 aa18.5■□□□□ 0.55
SCFD1-224ENST00000557713 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
SCFD1-224ENST00000557713 MYH7BA7E2Y1 1941 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 PNMA6FA0A0J9YX94 578 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 RBAK-RBAKDNI3L0D1 243 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 SORBS3O60504 671 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 GJB5O95377 273 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 UBA1P22314 1058 aaKnown RBP18.49■□□□□ 0.55
SCFD1-224ENST00000557713 CHMLP26374 656 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 CCND2P30279 289 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 IKBKEQ14164 716 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 NECAB3Q96P71 396 aaPredicted RBP18.49■□□□□ 0.55
SCFD1-224ENST00000557713 RAD9AQ99638 391 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 BCAS3Q9H6U6 928 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 COG5Q9UP83 839 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 TAF6LQ9Y6J9 622 aa18.49■□□□□ 0.55
SCFD1-224ENST00000557713 PRRC2BQ5JSZ5 2229 aaKnown RBP18.48■□□□□ 0.55
SCFD1-224ENST00000557713 E7EWF7 191 aa18.48■□□□□ 0.55
SCFD1-224ENST00000557713 EFCAB14O75071 495 aa18.48■□□□□ 0.55
SCFD1-224ENST00000557713 COL9A1P20849 921 aa18.48■□□□□ 0.55
SCFD1-224ENST00000557713 SERINC5Q86VE9 423 aa18.48■□□□□ 0.55
SCFD1-224ENST00000557713 FCHSD1Q86WN1 690 aa18.48■□□□□ 0.55
SCFD1-224ENST00000557713 MLXIPQ9HAP2 919 aa18.48■□□□□ 0.55
SCFD1-224ENST00000557713 LMCD1Q9NZU5 365 aa18.48■□□□□ 0.55
SCFD1-224ENST00000557713 BDP1A6H8Y1 2624 aa18.47■□□□□ 0.55
SCFD1-224ENST00000557713 ERICH2A1L162 156 aa18.47■□□□□ 0.55
SCFD1-224ENST00000557713 LGR5O75473 907 aa18.47■□□□□ 0.55
SCFD1-224ENST00000557713 HOXC8P31273 242 aa18.47■□□□□ 0.55
SCFD1-224ENST00000557713 MRPS9P82933 396 aaKnown RBP18.47■□□□□ 0.55
SCFD1-224ENST00000557713 WTAPQ15007 396 aa18.47■□□□□ 0.55
SCFD1-224ENST00000557713 NCOA7Q8NI08 942 aa18.47■□□□□ 0.55
SCFD1-224ENST00000557713 RUFY2Q8WXA3 655 aa18.47■□□□□ 0.55
SCFD1-224ENST00000557713 FRMPD4Q14CM0 1322 aa18.47■□□□□ 0.55
SCFD1-224ENST00000557713 H3BRB1 525 aa18.46■□□□□ 0.55
SCFD1-224ENST00000557713 ICAM3P32942 547 aa18.46■□□□□ 0.55
SCFD1-224ENST00000557713 ERVK-21P61565 698 aa18.46■□□□□ 0.55
SCFD1-224ENST00000557713 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
SCFD1-224ENST00000557713 IGDCC4Q8TDY8 1250 aa18.46■□□□□ 0.55
SCFD1-224ENST00000557713 HLA-CQ95604 372 aa18.46■□□□□ 0.55
SCFD1-224ENST00000557713 TUT1Q9H6E5 874 aaKnown RBP18.46■□□□□ 0.55
SCFD1-224ENST00000557713 SUGCTQ9HAC7 445 aa18.46■□□□□ 0.55
SCFD1-224ENST00000557713 TCF20Q9UGU0 1960 aaKnown RBP18.45■□□□□ 0.54
SCFD1-224ENST00000557713 C17orf102A2RUQ5 167 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 LINC01553A4QN01 128 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 RSPH10B2B2RC85 870 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 SPATA31C2B4DYI2 1134 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 LGALS2P05162 132 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 RSPH10BP0C881 870 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 THPOP40225 353 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 ANTXR2P58335 489 aa18.45■□□□□ 0.54
SCFD1-224ENST00000557713 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
SCFD1-224ENST00000557713 RALYLQ86SE5 291 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms