RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 TCP10Q12799 353 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 GPS2Q13227 327 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 ZSCAN26Q16670 478 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 FIGNQ5HY92 759 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 ZHX3Q9H4I2 956 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 RIC8AQ9NPQ8 531 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 KIAA1024Q9UPX6 916 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 SLC1A4P43007 532 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 EHHADHQ08426 723 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 CREG2Q8IUH2 290 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 SLF2Q8IX21 1173 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 FNBP4Q8N3X1 1017 aaPredicted RBP19.64■□□□□ 0.73
XRCC3-218ENST00000557439 EHBP1Q8NDI1 1231 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 TBC1D22AQ8WUA7 517 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 EXOC4Q96A65 974 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 GBP3Q9H0R5 595 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 PANK4Q9NVE7 773 aa19.64■□□□□ 0.73
XRCC3-218ENST00000557439 SEMA3FQ13275 785 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 TDRD12Q587J7 1177 aaKnown RBP19.63■□□□□ 0.73
XRCC3-218ENST00000557439 FOXR1Q6PIV2 292 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 CACNA2D4Q7Z3S7 1137 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 PSTPIP2Q9H939 334 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 DMGDHQ9UI17 866 aaKnown RBP19.63■□□□□ 0.73
XRCC3-218ENST00000557439 PCDHA12Q9UN75 941 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 LY75O60449 1722 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 TOM1O60784 492 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 BBOX1O75936 387 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 CLK2P49760 499 aaKnown RBP19.63■□□□□ 0.73
XRCC3-218ENST00000557439 CCDC40Q4G0X9 1142 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 COBLL1Q53SF7 1204 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 ZNF662Q6ZS27 426 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 CERS3Q8IU89 383 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 MYOCDQ8IZQ8 938 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 CUL5Q93034 780 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 MTMR8Q96EF0 704 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 RAB34Q9BZG1 259 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 SNX12Q9UMY4 172 aa19.63■□□□□ 0.73
XRCC3-218ENST00000557439 SYF2O95926 243 aaKnown RBP19.62■□□□□ 0.73
XRCC3-218ENST00000557439 CAPN2P17655 700 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 MAGEA1P43355 309 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 PDIA5Q14554 519 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 CDC42EP5Q6NZY7 148 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 LRRC1Q9BTT6 524 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 BCAS3Q9H6U6 928 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 PPEF1O14829 653 aaPredicted RBP19.62■□□□□ 0.73
XRCC3-218ENST00000557439 PPP1R2P41236 205 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 TUBB4BP68371 445 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 CDK17Q00537 523 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 KCTD19Q17RG1 926 aaPredicted RBP19.62■□□□□ 0.73
XRCC3-218ENST00000557439 HSP90B2PQ58FF3 399 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 FAM26FQ5R3K3 315 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 TAF3Q5VWG9 929 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 DNAAF5Q86Y56 855 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 P2RX7Q99572 595 aaKnown RBP19.62■□□□□ 0.73
XRCC3-218ENST00000557439 FAM204AQ9H8W3 233 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 HPCAL4Q9UM19 191 aa19.62■□□□□ 0.73
XRCC3-218ENST00000557439 TLR2O60603 784 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 USO1O60763 962 aaKnown RBP19.61■□□□□ 0.73
XRCC3-218ENST00000557439 HNRNPH3P31942 346 aaKnown RBP19.61■□□□□ 0.73
XRCC3-218ENST00000557439 CKAP4Q07065 602 aaKnown RBP19.61■□□□□ 0.73
XRCC3-218ENST00000557439 PDXDC1Q6P996 788 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 MS4A14Q96JA4 679 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 DNAJC18Q9H819 358 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 PLIN4Q96Q06 1357 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 UBAP1LF5GYI3 381 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 RNF40O75150 1001 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 TACC1O75410 805 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 NAP1L1P55209 391 aaKnown RBP19.61■□□□□ 0.73
XRCC3-218ENST00000557439 LRRC63Q05C16 580 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 HGSNATQ68CP4 663 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 TRIM34Q9BYJ4 488 aa19.61■□□□□ 0.73
XRCC3-218ENST00000557439 ARFGEF1Q9Y6D6 1849 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 ANO9A1A5B4 782 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 POTEFA5A3E0 1075 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 MEIS1O00470 390 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 ZBTB5O15062 677 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 NOL4O94818 638 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 POTEIP0CG38 1075 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 POLR2FP61218 127 aaKnown RBP19.6■□□□□ 0.73
XRCC3-218ENST00000557439 QRICH1Q2TAL8 776 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 ZCWPW2Q504Y3 356 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 PPP4R3AQ6IN85 833 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 POTEGQ6S5H5 508 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 POTEEQ6S8J3 1075 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 OSBPL9Q96SU4 736 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 SELENOOQ9BVL4 669 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 LSM14BQ9BX40 385 aaKnown RBP19.6■□□□□ 0.73
XRCC3-218ENST00000557439 ZC3H4Q9UPT8 1303 aaKnown RBP19.6■□□□□ 0.73
XRCC3-218ENST00000557439 FOCADQ5VW36 1801 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 MYH4Q9Y623 1939 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 POLRMTO00411 1230 aaKnown RBP19.6■□□□□ 0.73
XRCC3-218ENST00000557439 SKIDA1Q1XH10 827 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 SLC30A10Q6XR72 485 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 GPBP1Q86WP2 473 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 TRIM58Q8NG06 486 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 TSG101Q99816 390 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 LCMT1Q9UIC8 334 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 JRKLQ9Y4A0 524 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 COL4A3BPQ9Y5P4 624 aa19.6■□□□□ 0.73
XRCC3-218ENST00000557439 hCG_1984214I3L0E3 225 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms