RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 ACTN3Q08043 901 aaPredicted RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 MARCH10Q8NA82 808 aaPredicted RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 DDX47Q9H0S4 455 aaKnown RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 DDX60Q8IY21 1712 aaKnown RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 USP17L5A8MUK1 530 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 SHOX2O60902 331 aaPredicted RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 LDHBP07195 334 aaKnown RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 EMBQ6PCB8 327 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 CCDC84Q86UT8 332 aaPredicted RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 UHMK1Q8TAS1 419 aaKnown RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 TSG101Q99816 390 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 F8W031 263 aaPredicted RBP19.56■□□□□ 0.72
RCCD1-204ENST00000555737 SLURP2P0DP57 97 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 PAK2Q13177 524 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 PDXDC1Q6P996 788 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 CEP57Q86XR8 500 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 EYA3Q99504 573 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 BLOC1S4Q9NUP1 217 aa19.56■□□□□ 0.72
RCCD1-204ENST00000555737 ZNF804BA4D1E1 1349 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 GRM4Q14833 912 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 DCAF17Q5H9S7 520 aaPredicted RBP19.55■□□□□ 0.72
RCCD1-204ENST00000555737 C12orf60Q5U649 245 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 KCNV1Q6PIU1 500 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 BSDC1Q9NW68 430 aaPredicted RBP19.55■□□□□ 0.72
RCCD1-204ENST00000555737 E9PMD0 336 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 SLC16A2P36021 539 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 KCNMA1Q12791 1236 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 HERC4Q5GLZ8 1057 aaPredicted RBP19.55■□□□□ 0.72
RCCD1-204ENST00000555737 KRT79Q5XKE5 535 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 MCTP2Q6DN12 878 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 C7orf25Q9BPX7 421 aa19.55■□□□□ 0.72
RCCD1-204ENST00000555737 TLR2O60603 784 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 COPB2P35606 906 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 GNAQP50148 359 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 NBPF5PQ86XG9 351 aaPredicted RBP19.54■□□□□ 0.72
RCCD1-204ENST00000555737 BAP1Q92560 729 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 SPAG5Q96R06 1193 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 GOPCQ9HD26 462 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.54■□□□□ 0.72
RCCD1-204ENST00000555737 TAF1P21675 1872 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 LLGL1Q15334 1064 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 TMEM266Q2M3C6 531 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 CENPPQ6IPU0 288 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 KRT25Q7Z3Z0 450 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 ECM2O94769 699 aaPredicted RBP19.54■□□□□ 0.72
RCCD1-204ENST00000555737 SETQ01105 290 aaPredicted RBP19.54■□□□□ 0.72
RCCD1-204ENST00000555737 SF3B2Q13435 895 aaKnown RBP19.54■□□□□ 0.72
RCCD1-204ENST00000555737 DGKHQ86XP1 1220 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 PNMA5Q96PV4 448 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 COL4A1P02462 1669 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 BCL9O00512 1426 aa19.54■□□□□ 0.72
RCCD1-204ENST00000555737 TLDC2A0PJX2 215 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 CTNNA1P35221 906 aaKnown RBP19.53■□□□□ 0.72
RCCD1-204ENST00000555737 MKRN4PQ13434 485 aaPredicted RBP19.53■□□□□ 0.72
RCCD1-204ENST00000555737 ECM1Q16610 540 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 TBC1D9BQ66K14 1250 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 ZNF473Q8WTR7 871 aaKnown RBP19.53■□□□□ 0.72
RCCD1-204ENST00000555737 CCT8L2Q96SF2 557 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 SH3GL2Q99962 352 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 SEPT11Q9NVA2 429 aaKnown RBP19.53■□□□□ 0.72
RCCD1-204ENST00000555737 BCS1LQ9Y276 419 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 GNA11P29992 359 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 ALS2CLQ60I27 953 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 GBP6Q6ZN66 633 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 MYOCDQ8IZQ8 938 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 ZNF652Q9Y2D9 606 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 BCL9LQ86UU0 1499 aa19.53■□□□□ 0.72
RCCD1-204ENST00000555737 GOLGA6L7A0A1B0GV03 622 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 MEIS1O00470 390 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 ZSCAN29Q8IWY8 852 aaPredicted RBP19.52■□□□□ 0.72
RCCD1-204ENST00000555737 CEP95Q96GE4 821 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.52■□□□□ 0.721e-10■■■■■ 70.9
RCCD1-204ENST00000555737 DUOX1Q9NRD9 1551 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 M0R2N6 131 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 DDB1Q16531 1140 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 SCLT1Q96NL6 688 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 NLRP3Q96P20 1036 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 CELF4Q9BZC1 486 aaKnown RBP19.52■□□□□ 0.72
RCCD1-204ENST00000555737 PANK4Q9NVE7 773 aa19.52■□□□□ 0.72
RCCD1-204ENST00000555737 CCDC114Q96M63 670 aa19.52■□□□□ 0.71
RCCD1-204ENST00000555737 AMACRQ9UHK6 382 aa19.52■□□□□ 0.71
RCCD1-204ENST00000555737 KIAA1024Q9UPX6 916 aa19.52■□□□□ 0.71
RCCD1-204ENST00000555737 CICQ96RK0 1608 aaPredicted RBP19.52■□□□□ 0.71
RCCD1-204ENST00000555737 HGSO14964 777 aaPredicted RBP19.51■□□□□ 0.71
RCCD1-204ENST00000555737 FGRP09769 529 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 FLT3P36888 993 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 RPS6KA1Q15418 735 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 HGSNATQ68CP4 663 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 CHADLQ6NUI6 762 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 UNC13DQ70J99 1090 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 B4GALNT4Q76KP1 1039 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 FBXO33Q7Z6M2 555 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 NLRP14Q86W24 1093 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 COL4A3BPQ9Y5P4 624 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 A0A1W2PQJ5 194 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 PPP1R37O75864 691 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 SLC9A1P19634 815 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 STAT3P40763 770 aa19.51■□□□□ 0.71
RCCD1-204ENST00000555737 MEFVO15553 781 aaPredicted RBP19.5■□□□□ 0.71
RCCD1-204ENST00000555737 ITGA4P13612 1032 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms