RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 HOMER1Q86YM7 354 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 DHX37Q8IY37 1157 aaKnown RBP18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 C7orf31Q8N865 590 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 RUFY2Q8WXA3 655 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 E7EWF7 191 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 SGSM2O43147 1006 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 NBNO60934 754 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 PARNO95453 639 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 MYCLP12524 364 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 UBA1P22314 1058 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 WDR5P61964 334 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 MRPS5P82675 430 aaKnown RBP18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 SP2Q02086 613 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 PTK7Q13308 1070 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 HSDL1Q3SXM5 330 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 WNT8BQ93098 351 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 ALG1Q9BT22 464 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 MTCH2Q9Y6C9 303 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 FRMPD4Q14CM0 1322 aa18.19■□□□□ 0.5
ARHGEF40-205ENST00000555052 PNMA6FA0A0J9YX94 578 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 GCOM1H8Y6P7 765 aaPredicted RBP18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 TNFRSF10AO00220 468 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 RFXAPO00287 272 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 PPFIA4O75335 1185 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 GGPS1O95749 300 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 POLR2MP0CAP2 368 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 TGFB3P10600 412 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 ANTXR2P58335 489 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 TRAF1Q13077 416 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 HIC1Q14526 733 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 TCTN1Q2MV58 587 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 CNKSR3Q6P9H4 555 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 GPKOWQ92917 476 aaPredicted RBP eCLIP18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 SPATA33Q96N06 139 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 CERS4Q9HA82 394 aa18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 SUPT16HQ9Y5B9 1047 aaKnown RBP18.18■□□□□ 0.5
ARHGEF40-205ENST00000555052 CCND2P30279 289 aa18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 KCNJ6P48051 423 aa18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 ZNF200P98182 395 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 MBTPS1Q14703 1052 aa18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 WTAPQ15007 396 aa18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 RALYLQ86SE5 291 aaKnown RBP18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 MB21D2Q8IYB1 491 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 NCOA7Q8NI08 942 aa18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 IGDCC4Q8TDY8 1250 aa18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 C16orf70Q9BSU1 422 aa18.17■□□□□ 0.5
ARHGEF40-205ENST00000555052 ERICH2A1L162 156 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 KIF28PB7ZC32 967 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 SORBS3O60504 671 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 HOXC8P31273 242 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 DEFB103AP81534 67 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 SART3Q15020 963 aaKnown RBP18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 SPRED2Q7Z698 418 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 FCHSD1Q86WN1 690 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 MICALL1Q8N3F8 863 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 ADAMTS19Q8TE59 1207 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 ARNTL2Q8WYA1 636 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 MAP4K1Q92918 833 aa18.16■□□□□ 0.5
ARHGEF40-205ENST00000555052 LCHNA4D1U4 455 aa18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 RBAK-RBAKDNI3L0D1 243 aa18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 TLL1O43897 1013 aa18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 MRPS9P82933 396 aaKnown RBP18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 ZNF618Q5T7W0 954 aa18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 TMCO2Q7Z6W1 182 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 CATIPQ7Z7H3 387 aa18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 SERINC5Q86VE9 423 aa18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 ZFP91Q96JP5 570 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 INPP4AQ96PE3 977 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 TSPYL2Q9H2G4 693 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 BCAS3Q9H6U6 928 aa18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 TCF20Q9UGU0 1960 aaKnown RBP18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 COL4A4P53420 1690 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF40-205ENST00000555052 ABHD14A-ACY1A0A1B0GW23 586 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 GTPBP6O43824 516 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 LPXNO60711 386 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 ICAM3P32942 547 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 SEMA3FQ13275 785 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 MKRN4PQ13434 485 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 KRT40Q6A162 431 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 UHRF1Q96T88 793 aaPredicted RBP18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 MAP3K14Q99558 947 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 SPZ1Q9BXG8 430 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 LY9Q9HBG7 655 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 MICAL3Q7RTP6 2002 aa18.14■□□□□ 0.49
ARHGEF40-205ENST00000555052 EFCAB14O75071 495 aa18.13■□□□□ 0.49
ARHGEF40-205ENST00000555052 STAM2O75886 525 aa18.13■□□□□ 0.49
ARHGEF40-205ENST00000555052 GJB5O95377 273 aa18.13■□□□□ 0.49
ARHGEF40-205ENST00000555052 TFF2Q03403 129 aa18.13■□□□□ 0.49
ARHGEF40-205ENST00000555052 GRB10Q13322 594 aa18.13■□□□□ 0.49
ARHGEF40-205ENST00000555052 MLXIPQ9HAP2 919 aa18.13■□□□□ 0.49
ARHGEF40-205ENST00000555052 RBM8AQ9Y5S9 174 aaKnown RBP18.13■□□□□ 0.49
ARHGEF40-205ENST00000555052 DOCK5Q9H7D0 1870 aa18.13■□□□□ 0.49
ARHGEF40-205ENST00000555052 SPATA31C2B4DYI2 1134 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 DDAH1O94760 285 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 LGALS2P05162 132 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 BMP1P13497 986 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 GNPTABQ3T906 1256 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 METTL7BQ6UX53 244 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 ZNF654Q8IZM8 581 aa18.12■□□□□ 0.49
ARHGEF40-205ENST00000555052 RAD9AQ99638 391 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms