RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 BFSP2Q13515 415 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 MYSM1Q5VVJ2 828 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 RAB11FIP4Q86YS3 637 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 CMTR1Q8N1G2 835 aaKnown RBP13.71□□□□□ -0.21
PSMC6-207ENST00000554952 C7orf31Q8N865 590 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 MAFAQ8NHW3 353 aaPredicted RBP13.71□□□□□ -0.21
PSMC6-207ENST00000554952 PPTC7Q8NI37 304 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 SMARCC2Q8TAQ2 1214 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 EMID1Q96A84 441 aaPredicted RBP13.71□□□□□ -0.21
PSMC6-207ENST00000554952 SPATA33Q96N06 139 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 SPZ1Q9BXG8 430 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 LRRC2Q9BYS8 371 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 SEC63Q9UGP8 760 aaKnown RBP13.71□□□□□ -0.21
PSMC6-207ENST00000554952 SLC12A7Q9Y666 1083 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 SLC4A7Q9Y6M7 1214 aa13.71□□□□□ -0.21
PSMC6-207ENST00000554952 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.22
PSMC6-207ENST00000554952 PPFIA4O75335 1185 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 GGPS1O95749 300 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 IQCF3P0C7M6 154 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 ZNF286BP0CG31 522 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 TGFB3P10600 412 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 LIFRP42702 1097 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 PSEN2P49810 448 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 RAB30Q15771 203 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 CELF3Q5SZQ8 465 aaKnown RBP13.7□□□□□ -0.22
PSMC6-207ENST00000554952 RNF20Q5VTR2 975 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 GDF6Q6KF10 455 aaPredicted RBP13.7□□□□□ -0.22
PSMC6-207ENST00000554952 USP17L6PQ6QN14 398 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 CCDC82Q8N4S0 544 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
PSMC6-207ENST00000554952 GPKOWQ92917 476 aaPredicted RBP eCLIP13.7□□□□□ -0.224e-7■■■■■ 29.5
PSMC6-207ENST00000554952 CUL5Q93034 780 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 VWCEQ96DN2 955 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 FTOQ9C0B1 505 aaKnown RBP eCLIP13.7□□□□□ -0.22
PSMC6-207ENST00000554952 MLXIPQ9HAP2 919 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 RTEL1Q9NZ71 1219 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 HDAC6Q9UBN7 1215 aa13.7□□□□□ -0.22
PSMC6-207ENST00000554952 PFKMP08237 780 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 CALM1P0DP23 149 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 CALM2P0DP24 149 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 CALM3P0DP25 149 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 RFC2P35250 354 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 RABGGTBP53611 331 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 MFSD10Q14728 455 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 KIAA0753Q2KHM9 967 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 HSDL1Q3SXM5 330 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 SYNE3Q6ZMZ3 975 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 SESTD1Q86VW0 696 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
PSMC6-207ENST00000554952 CCDC155Q8N6L0 562 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 FANCBQ8NB91 859 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 KATNAL1Q9BW62 490 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
PSMC6-207ENST00000554952 SCN5AQ14524 2016 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 hCG_1642624A0A1W2PR95 340 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 ACTN1P12814 892 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 ATP2A2P16615 1042 aaKnown RBP13.68□□□□□ -0.22
PSMC6-207ENST00000554952 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
PSMC6-207ENST00000554952 MRPS9P82933 396 aaKnown RBP13.68□□□□□ -0.22
PSMC6-207ENST00000554952 GNPTABQ3T906 1256 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 NEK1Q96PY6 1258 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 CTAGE1Q96RT6 745 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 NKX2-4Q9H2Z4 354 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 PRDM12Q9H4Q4 367 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 BCAS3Q9H6U6 928 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 PSTPIP2Q9H939 334 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 GTF2IRD1Q9UHL9 959 aa13.68□□□□□ -0.22
PSMC6-207ENST00000554952 TET1Q8NFU7 2136 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 SPATA31C2B4DYI2 1134 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 HAS3O00219 553 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 MEIS2O14770 477 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 CDC45O75419 566 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 STAM2O75886 525 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 F2P00734 622 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 MYOGP15173 224 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 ZNF200P98182 395 aaPredicted RBP13.67□□□□□ -0.22
PSMC6-207ENST00000554952 MICU3Q86XE3 530 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 CAGE1Q8TC20 777 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
PSMC6-207ENST00000554952 YBX2Q9Y2T7 364 aaKnown RBP13.67□□□□□ -0.22
PSMC6-207ENST00000554952 PIK3CDO00329 1044 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 NOP56O00567 594 aaKnown RBP13.66□□□□□ -0.22
PSMC6-207ENST00000554952 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
PSMC6-207ENST00000554952 SELPP16109 830 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 ICAM3P32942 547 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 EXOSC10Q01780 885 aaKnown RBP13.66□□□□□ -0.22
PSMC6-207ENST00000554952 NEDD9Q14511 834 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 CYFIP1Q7L576 1253 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
PSMC6-207ENST00000554952 SGMS1Q86VZ5 419 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 AFAP1L1Q8TED9 768 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 DHX38Q92620 1227 aaKnown RBP13.66□□□□□ -0.22
PSMC6-207ENST00000554952 CCDC136Q96JN2 1154 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 INPP4AQ96PE3 977 aaPredicted RBP13.66□□□□□ -0.22
PSMC6-207ENST00000554952 GAS2L1Q99501 681 aaPredicted RBP13.66□□□□□ -0.22
PSMC6-207ENST00000554952 C16orf70Q9BSU1 422 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 PCDHA11Q9Y5I1 949 aa13.66□□□□□ -0.22
PSMC6-207ENST00000554952 FIBPO43427 364 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms