RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 SPATA31C2B4DYI2 1134 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 GGPS1O95749 300 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 RBL2Q08999 1139 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 HSDL1Q3SXM5 330 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 XRRA1Q6P2D8 792 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 DEFB128Q7Z7B8 93 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 SKAP1Q86WV1 359 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 MAFAQ8NHW3 353 aaPredicted RBP12.83□□□□□ -0.36
ABCD4-221ENST00000554453 GPKOWQ92917 476 aaPredicted RBP eCLIP12.83□□□□□ -0.362e-6■■■■■ 39.1
ABCD4-221ENST00000554453 CUL5Q93034 780 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 INPP4AQ96PE3 977 aaPredicted RBP12.83□□□□□ -0.36
ABCD4-221ENST00000554453 NEK1Q96PY6 1258 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 ALG1Q9BT22 464 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 MLXIPQ9HAP2 919 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.36
ABCD4-221ENST00000554453 GTF2IRD1Q9UHL9 959 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 NOD1Q9Y239 953 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 SLC12A7Q9Y666 1083 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 FRMPD4Q14CM0 1322 aa12.83□□□□□ -0.36
ABCD4-221ENST00000554453 NCOR1O75376 2440 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 A0A0C4DFX4 3053 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 PLEKHA8P1O95397 391 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 PARNO95453 639 aaKnown RBP12.82□□□□□ -0.36
ABCD4-221ENST00000554453 F2P00734 622 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 ACTN1P12814 892 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 FOSL2P15408 326 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 NEDD9Q14511 834 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 MFSD10Q14728 455 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 GPNMBQ14956 572 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 KIAA0753Q2KHM9 967 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 DHX32Q7L7V1 743 aaKnown RBP12.82□□□□□ -0.36
ABCD4-221ENST00000554453 CCDC155Q8N6L0 562 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 C7orf31Q8N865 590 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 PHOSPHO2Q8TCD6 241 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 AFAP1L1Q8TED9 768 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 C16orf70Q9BSU1 422 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 LRRC2Q9BYS8 371 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 BCAS3Q9H6U6 928 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 PSTPIP2Q9H939 334 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 RTEL1Q9NZ71 1219 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 PCDHA11Q9Y5I1 949 aa12.82□□□□□ -0.36
ABCD4-221ENST00000554453 SELPP16109 830 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 ATP2A2P16615 1042 aaKnown RBP12.81□□□□□ -0.36
ABCD4-221ENST00000554453 RXRAP19793 462 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 UBA1P22314 1058 aaKnown RBP12.81□□□□□ -0.36
ABCD4-221ENST00000554453 SEMA3FQ13275 785 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 PTK7Q13308 1070 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 GNPTABQ3T906 1256 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 PCNX4Q63HM2 1172 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 SYNE3Q6ZMZ3 975 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.81□□□□□ -0.36
ABCD4-221ENST00000554453 RASEFQ8IZ41 740 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 CMTR1Q8N1G2 835 aaKnown RBP12.81□□□□□ -0.36
ABCD4-221ENST00000554453 DHX38Q92620 1227 aaKnown RBP12.81□□□□□ -0.36
ABCD4-221ENST00000554453 SENP7Q9BQF6 1050 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 USP26Q9BXU7 913 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 NKX2-4Q9H2Z4 354 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 SLC28A3Q9HAS3 691 aa12.81□□□□□ -0.36
ABCD4-221ENST00000554453 YBX2Q9Y2T7 364 aaKnown RBP12.81□□□□□ -0.36
ABCD4-221ENST00000554453 PRRC2BQ5JSZ5 2229 aaKnown RBP12.81□□□□□ -0.36
ABCD4-221ENST00000554453 ZBBXA8MT70 800 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 H3BRB1 525 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 FIBPO43427 364 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 CDC45O75419 566 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 CKBP12277 381 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 RABGGTBP53611 331 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 TRIM71Q2Q1W2 868 aaKnown RBP12.8□□□□□ -0.36
ABCD4-221ENST00000554453 METTL7BQ6UX53 244 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 TMTC3Q6ZXV5 915 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 CCDC82Q8N4S0 544 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 KCNB2Q92953 911 aa12.8□□□□□ -0.36
ABCD4-221ENST00000554453 FTOQ9C0B1 505 aaKnown RBP eCLIP12.8□□□□□ -0.36
ABCD4-221ENST00000554453 TUT1Q9H6E5 874 aaKnown RBP12.8□□□□□ -0.36
ABCD4-221ENST00000554453 MAFGO15525 162 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 SORBS3O60504 671 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 CXCL10P02778 98 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 ZNF200P98182 395 aaPredicted RBP12.79□□□□□ -0.36
ABCD4-221ENST00000554453 HIC1Q14526 733 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 KRT32Q14532 448 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 APOA5Q6Q788 366 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 CYFIP1Q7L576 1253 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 NLRX1Q86UT6 975 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 RAB11FIP4Q86YS3 637 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 TEX2Q8IWB9 1127 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 SLC9A7Q96T83 725 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 GAS2L1Q99501 681 aaPredicted RBP12.79□□□□□ -0.36
ABCD4-221ENST00000554453 PRDM12Q9H4Q4 367 aa12.79□□□□□ -0.36
ABCD4-221ENST00000554453 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
ABCD4-221ENST00000554453 hCG_1642624A0A1W2PR95 340 aa12.78□□□□□ -0.36
ABCD4-221ENST00000554453 KIF28PB7ZC32 967 aa12.78□□□□□ -0.36
ABCD4-221ENST00000554453 BAIAP3O94812 1187 aa12.78□□□□□ -0.36
ABCD4-221ENST00000554453 LGALS2P05162 132 aa12.78□□□□□ -0.36
ABCD4-221ENST00000554453 HMGB1P09429 215 aaKnown RBP12.78□□□□□ -0.36
ABCD4-221ENST00000554453 MYOGP15173 224 aa12.78□□□□□ -0.36
ABCD4-221ENST00000554453 HOXC8P31273 242 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms