RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 F13A1P00488 732 aa18.39■□□□□ 0.53
ACTN1-209ENST00000553659 IQCF3P0C7M6 154 aa18.39■□□□□ 0.53
ACTN1-209ENST00000553659 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.53
ACTN1-209ENST00000553659 USH1GQ495M9 461 aa18.39■□□□□ 0.53
ACTN1-209ENST00000553659 MB21D2Q8IYB1 491 aaPredicted RBP18.39■□□□□ 0.53
ACTN1-209ENST00000553659 ESR2Q92731 530 aa18.39■□□□□ 0.53
ACTN1-209ENST00000553659 TSPYL2Q9H2G4 693 aaPredicted RBP18.39■□□□□ 0.53
ACTN1-209ENST00000553659 LMBRD1Q9NUN5 540 aa18.39■□□□□ 0.53
ACTN1-209ENST00000553659 LAMA4Q16363 1823 aa18.39■□□□□ 0.53
ACTN1-209ENST00000553659 GOLGA8HP0CJ92 632 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 NT5C2P49902 561 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 ST3GAL1Q11201 340 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 BFSP2Q13515 415 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 LARP1BQ659C4 914 aaKnown RBP18.38■□□□□ 0.53
ACTN1-209ENST00000553659 NECAB1Q8N987 351 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 TMEM87AQ8NBN3 555 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 PHOSPHO2Q8TCD6 241 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 ADAMTS19Q8TE59 1207 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 PPP1R13LQ8WUF5 828 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 TCEANC2Q96MN5 208 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 SLC9A7Q96T83 725 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 ZKSCAN3Q9BRR0 538 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 LARP6Q9BRS8 491 aaKnown RBP18.38■□□□□ 0.53
ACTN1-209ENST00000553659 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
ACTN1-209ENST00000553659 ARIH2O95376 493 aa18.37■□□□□ 0.53
ACTN1-209ENST00000553659 POU3F3P20264 500 aaPredicted RBP18.37■□□□□ 0.53
ACTN1-209ENST00000553659 CCDC178Q5BJE1 867 aa18.37■□□□□ 0.53
ACTN1-209ENST00000553659 CCDC62Q6P9F0 684 aa18.37■□□□□ 0.53
ACTN1-209ENST00000553659 TMEM87BQ96K49 555 aa18.37■□□□□ 0.53
ACTN1-209ENST00000553659 CPVLQ9H3G5 476 aa18.37■□□□□ 0.53
ACTN1-209ENST00000553659 NEDD4P46934 1319 aa18.37■□□□□ 0.53
ACTN1-209ENST00000553659 PTPRSQ13332 1948 aa18.37■□□□□ 0.53
ACTN1-209ENST00000553659 PRC1O43663 620 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 ABCB11O95342 1321 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 CA3P07451 260 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 CDC37Q16543 378 aaPredicted RBP18.36■□□□□ 0.53
ACTN1-209ENST00000553659 PRRC2BQ5JSZ5 2229 aaKnown RBP18.36■□□□□ 0.53
ACTN1-209ENST00000553659 IQCA1Q86XH1 822 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 PNMA1Q8ND90 353 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 SMARCC2Q8TAQ2 1214 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 NSUN6Q8TEA1 469 aaKnown RBP18.36■□□□□ 0.53
ACTN1-209ENST00000553659 TBC1D5Q92609 795 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 ANKS1AQ92625 1134 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 KRT23Q9C075 422 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 FTOQ9C0B1 505 aaKnown RBP eCLIP18.36■□□□□ 0.53
ACTN1-209ENST00000553659 MTMR6Q9Y217 621 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 NOD1Q9Y239 953 aa18.36■□□□□ 0.53
ACTN1-209ENST00000553659 GOLGA6L3A6NEY3 463 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 PRPF40AO75400 957 aaKnown RBP18.35■□□□□ 0.53
ACTN1-209ENST00000553659 PTGISQ16647 500 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 ADGRF4Q8IZF3 695 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 MICALL1Q8N3F8 863 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 FAM184AQ8NB25 1140 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 SYTL5Q8TDW5 730 aaPredicted RBP18.35■□□□□ 0.53
ACTN1-209ENST00000553659 AFG1LQ8WV93 481 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 SYAP1Q96A49 352 aaPredicted RBP18.35■□□□□ 0.53
ACTN1-209ENST00000553659 TAAR1Q96RJ0 339 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 IWS1Q96ST2 819 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 UHRF1Q96T88 793 aaPredicted RBP18.35■□□□□ 0.53
ACTN1-209ENST00000553659 CHD7Q9P2D1 2997 aa18.35■□□□□ 0.53
ACTN1-209ENST00000553659 KIF28PB7ZC32 967 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 RFXAPO00287 272 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 KDM4AO75164 1064 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 GH1P01241 217 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 SCRN1Q12765 414 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 LY6KQ17RY6 165 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 SEPT14Q6ZU15 432 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 SESTD1Q86VW0 696 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 MCF2L2Q86YR7 1114 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 CAGE1Q8TC20 777 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 KAT14Q9H8E8 782 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 MTCH2Q9Y6C9 303 aa18.34■□□□□ 0.53
ACTN1-209ENST00000553659 NCOR1O75376 2440 aa18.33■□□□□ 0.53
ACTN1-209ENST00000553659 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.52
ACTN1-209ENST00000553659 GTPBP6O43824 516 aaPredicted RBP18.33■□□□□ 0.52
ACTN1-209ENST00000553659 BAIAP3O94812 1187 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 MMP3P08254 477 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 BMP1P13497 986 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 COL9A1P20849 921 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 TAP1Q03518 808 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 ARHGAP1Q07960 439 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 STK3Q13188 491 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 STXBP2Q15833 593 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 AAK1Q2M2I8 961 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 ASPRV1Q53RT3 343 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 HERC6Q8IVU3 1022 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 CCDC155Q8N6L0 562 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 AFAP1L1Q8TED9 768 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 CTAGE1Q96RT6 745 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 ZSCAN10Q96SZ4 725 aaPredicted RBP18.33■□□□□ 0.52
ACTN1-209ENST00000553659 RMDN3Q96TC7 470 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 ZSCAN16Q9H4T2 348 aaPredicted RBP18.33■□□□□ 0.52
ACTN1-209ENST00000553659 CERS4Q9HA82 394 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 ZSWIM5Q9P217 1185 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 COL20A1Q9P218 1284 aa18.33■□□□□ 0.52
ACTN1-209ENST00000553659 B4E1Z4 1266 aa18.32■□□□□ 0.52
ACTN1-209ENST00000553659 PDIA3P30101 505 aaKnown RBP18.32■□□□□ 0.52
ACTN1-209ENST00000553659 APOBRQ0VD83 1088 aa18.32■□□□□ 0.52
ACTN1-209ENST00000553659 SART3Q15020 963 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms