RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 ZNF333Q96JL9 665 aa23.27■■□□□ 1.32
SDR39U1-204ENST00000553343 KCNH7Q9NS40 1196 aa23.27■■□□□ 1.32
SDR39U1-204ENST00000553343 MORC2Q9Y6X9 1032 aaPredicted RBP23.27■■□□□ 1.32
SDR39U1-204ENST00000553343 NFASCO94856 1347 aa23.27■■□□□ 1.32
SDR39U1-204ENST00000553343 FAM205CA6NFA0 338 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 CCDC144BQ3MJ40 725 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 SEPT14Q6ZU15 432 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 EEPD1Q7L9B9 569 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 FERMT3Q86UX7 667 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 SLFN12Q8IYM2 578 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 EMID1Q96A84 441 aaPredicted RBP23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 LENG9Q96B70 501 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 FAM20AQ96MK3 541 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 WDR11Q9BZH6 1224 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 MCOLN1Q9GZU1 580 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 TBC1D22BQ9NU19 505 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 RTEL1Q9NZ71 1219 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 DDX41Q9UJV9 622 aaKnown RBP23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 CEP131Q9UPN4 1083 aa23.26■■□□□ 1.31
SDR39U1-204ENST00000553343 NEMFO60524 1076 aa23.25■■□□□ 1.31
SDR39U1-204ENST00000553343 NKX3-2P78367 333 aa23.25■■□□□ 1.31
SDR39U1-204ENST00000553343 TNFAIP2Q03169 654 aa23.25■■□□□ 1.31
SDR39U1-204ENST00000553343 PRR16Q569H4 304 aa23.25■■□□□ 1.31
SDR39U1-204ENST00000553343 SH3TC2Q8TF17 1288 aa23.25■■□□□ 1.31
SDR39U1-204ENST00000553343 KCNMB3Q9NPA1 279 aa23.25■■□□□ 1.31
SDR39U1-204ENST00000553343 PAK6Q9NQU5 681 aaPredicted RBP23.25■■□□□ 1.31
SDR39U1-204ENST00000553343 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.25■■□□□ 1.31
SDR39U1-204ENST00000553343 DUSP11O75319 330 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 BAG4O95429 457 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 TDP2O95551 362 aa23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 TXNP10599 105 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 TRIM32Q13049 653 aa23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 PKP1Q13835 747 aa23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 TRPV1Q8NER1 839 aa23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 ZNF396Q96N95 335 aaPredicted RBP23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 RIT2Q99578 217 aa23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 AGO4Q9HCK5 861 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 CHMP5Q9NZZ3 219 aa23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 DDX20Q9UHI6 824 aaKnown RBP23.24■■□□□ 1.31
SDR39U1-204ENST00000553343 GH1P01241 217 aa23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 RARBP10826 455 aa23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 KCNA2P16389 499 aa23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 ADCYAP1R1P41586 468 aa23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 TOB1P50616 345 aaPredicted RBP23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 SEMA3FQ13275 785 aa23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 ETNPPLQ8TBG4 499 aa23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 ZNF577Q9BSK1 485 aa23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 GNEQ9Y223 722 aaKnown RBP23.23■■□□□ 1.31
SDR39U1-204ENST00000553343 IPO5O00410 1097 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 UBA1P22314 1058 aaKnown RBP23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 PRPHP41219 470 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 LAMC2Q13753 1193 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 PRAMEF19Q5SWL8 479 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 METTL7BQ6UX53 244 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 CYP2W1Q8TAV3 490 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 SDF4Q9BRK5 362 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 SPC25Q9HBM1 224 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 PDGFCQ9NRA1 345 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 POLR3EQ9NVU0 708 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 TCEAL9Q9UHQ7 104 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 ZDHHC9Q9Y397 364 aa23.22■■□□□ 1.31
SDR39U1-204ENST00000553343 MSH4O15457 936 aa23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 SLC37A4O43826 429 aa23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 ARP10275 920 aa23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 SMPD1P17405 629 aa23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 CNGA1P29973 690 aa23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 CCND3P30281 292 aaPredicted RBP23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 ARL6IP4Q66PJ3 421 aaKnown RBP23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 SLC5A5Q92911 643 aa23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 UPF3AQ9H1J1 476 aaKnown RBP23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 CFAP45Q9UL16 551 aa23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 DDX49Q9Y6V7 483 aaKnown RBP23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 FRMPD3Q5JV73 1810 aa23.21■■□□□ 1.31
SDR39U1-204ENST00000553343 ARIH2O95376 493 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 CCL5P13501 91 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 MCM7P33993 719 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 GJA9P57773 515 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 KRT76Q01546 638 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 CALCRLQ16602 461 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 BRDTQ58F21 947 aaPredicted RBP23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 CELF3Q5SZQ8 465 aaKnown RBP23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 POTEDQ86YR6 584 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 MTMR9Q96QG7 549 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 PCDHB6Q9Y5E3 794 aa23.2■■□□□ 1.3
SDR39U1-204ENST00000553343 OR52Z1P0C646 297 aa23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 CST5P28325 142 aaPredicted RBP23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 NASPP49321 788 aaPredicted RBP23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 ATP2C1P98194 919 aaPredicted RBP23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 TLK2Q86UE8 772 aa23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 DHX37Q8IY37 1157 aaKnown RBP23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 RDM1Q8NG50 284 aa23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 TEKT3Q9BXF9 490 aa23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 AP5M1Q9H0R1 490 aa23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 JPH1Q9HDC5 661 aaPredicted RBP23.19■■□□□ 1.3
SDR39U1-204ENST00000553343 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.18■■□□□ 1.3
SDR39U1-204ENST00000553343 MARCH6O60337 910 aa23.18■■□□□ 1.3
SDR39U1-204ENST00000553343 PSMD10O75832 226 aa23.18■■□□□ 1.3
SDR39U1-204ENST00000553343 FARP2O94887 1054 aaPredicted RBP23.18■■□□□ 1.3
SDR39U1-204ENST00000553343 YEATS4O95619 227 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms