RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MAF1Q9H063 256 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 MRPL11Q9Y3B7 192 aaKnown RBP10.61□□□□□ -0.71
SYNE2-209ENST00000553308 INSL6Q9Y581 213 aa10.61□□□□□ -0.71
SYNE2-209ENST00000553308 MYH6P13533 1939 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 H3BQ06 376 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 OPLAHO14841 1288 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 DHX16O60231 1041 aaKnown RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 KDM4AO75164 1064 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 EIF3JO75822 258 aaKnown RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 RGS20O76081 388 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 CFBP00751 764 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 AMHP03971 560 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 HOXD8P13378 290 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 THPOP40225 353 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 HTRA4P83105 476 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 HSDL1Q3SXM5 330 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 EPC2Q52LR7 807 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 ALYREFQ86V81 257 aaKnown RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 SERINC5Q86VE9 423 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 IL31RAQ8NI17 732 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 MRPL38Q96DV4 380 aaKnown RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 UIMC1Q96RL1 719 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 OSBPL7Q9BZF2 842 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 VAT1LQ9HCJ6 419 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
SYNE2-209ENST00000553308 MYH7BA7E2Y1 1941 aa10.6□□□□□ -0.71
SYNE2-209ENST00000553308 EMSYQ7Z589 1322 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 RSPH10B2B2RC85 870 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 B4E1Z4 1266 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 GGPS1O95749 300 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 RSPH10BP0C881 870 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 MYCLP12524 364 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-209ENST00000553308 UBA1P22314 1058 aaKnown RBP10.59□□□□□ -0.71
SYNE2-209ENST00000553308 HSD17B4P51659 736 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 PLEKHG4Q58EX7 1191 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 CELF3Q5SZQ8 465 aaKnown RBP10.59□□□□□ -0.71
SYNE2-209ENST00000553308 MYSM1Q5VVJ2 828 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 IQCA1Q86XH1 822 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 ENAHQ8N8S7 591 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-209ENST00000553308 NEK9Q8TD19 979 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 GPKOWQ92917 476 aaPredicted RBP eCLIP10.59□□□□□ -0.71
SYNE2-209ENST00000553308 ZFP91Q96JP5 570 aaPredicted RBP10.59□□□□□ -0.71
SYNE2-209ENST00000553308 SPATA33Q96N06 139 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 PDCD2LQ9BRP1 358 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 C16orf70Q9BSU1 422 aa10.59□□□□□ -0.71
SYNE2-209ENST00000553308 NLRC5Q86WI3 1866 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 COL4A6Q14031 1691 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 TRIM6-TRIM34B2RNG4 842 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 ZNF213O14771 459 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 PPP1R11O60927 126 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-209ENST00000553308 PPFIA4O75335 1185 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 CTSHP09668 335 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 PARP1P09874 1014 aaKnown RBP10.58□□□□□ -0.72
SYNE2-209ENST00000553308 ALADP13716 330 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 HOXA13P31271 388 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-209ENST00000553308 HOXC8P31273 242 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 SP2Q02086 613 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 PGM5Q15124 567 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 PTPROQ16827 1216 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 TIGD5Q53EQ6 642 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 TCEAL5Q5H9L2 206 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 EP400NLQ6ZTU2 488 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 STAG2Q8N3U4 1231 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 BANK1Q8NDB2 785 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 ANKS1AQ92625 1134 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 ATP6V0A1Q93050 837 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 RILPL2Q969X0 211 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 ZSCAN10Q96SZ4 725 aaPredicted RBP10.58□□□□□ -0.72
SYNE2-209ENST00000553308 YME1L1Q96TA2 773 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 ATG2AQ2TAZ0 1938 aa10.58□□□□□ -0.72
SYNE2-209ENST00000553308 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.57□□□□□ -0.72
SYNE2-209ENST00000553308 C17orf102A2RUQ5 167 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 H3BNC9 293 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 TREHO43280 583 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 DCXO43602 365 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 UPP2O95045 317 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 SMIM10L2AP0DMW4 78 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 SMIM10L2BP0DMW5 78 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 GHRHRQ02643 423 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 GPM6BQ13491 265 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 PUS10Q3MIT2 529 aaKnown RBP10.57□□□□□ -0.72
SYNE2-209ENST00000553308 CCDC178Q5BJE1 867 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 TICAM2Q86XR7 235 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 TMEM192Q8IY95 271 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 SEPT8Q92599 483 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 TOP1MTQ969P6 601 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 SAMD11Q96NU1 681 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 AMNQ9BXJ7 453 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 BCAS3Q9H6U6 928 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 CTNNA3Q9UI47 895 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 MUC6Q6W4X9 2439 aa10.57□□□□□ -0.72
SYNE2-209ENST00000553308 RALGAPA2Q2PPJ7 1873 aa10.56□□□□□ -0.72
SYNE2-209ENST00000553308 H3BRB1 525 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms