RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 TPH2Q8IWU9 490 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 C1orf159Q96HA4 380 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 FOXQ1Q9C009 403 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 FLT4P35916 1363 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 AATKQ6ZMQ8 1374 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 NPC1L1Q9UHC9 1359 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 COL5A2P05997 1499 aaPredicted RBP4.77□□□□□ -1.65
APAF1-208ENST00000549007 MAP2P11137 1827 aaKnown RBP4.77□□□□□ -1.65
APAF1-208ENST00000549007 USP54Q70EL1 1684 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 SLIT2O94813 1529 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 TNKSO95271 1327 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 SHISA3A0PJX4 238 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 GPR39O43194 453 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 CAPNS1P04632 268 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 NFICP08651 508 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 ITGA4P13612 1032 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 C2CD4AQ8NCU7 369 aaPredicted RBP4.77□□□□□ -1.65
APAF1-208ENST00000549007 FBLIM1Q8WUP2 373 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 TRIM11Q96F44 468 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 ATXN3LQ9H3M9 355 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 MS4A5Q9H3V2 200 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 MYBBP1AQ9BQG0 1328 aaKnown RBP4.77□□□□□ -1.65
APAF1-208ENST00000549007 A0A0A0MRY4 1105 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 MSCO60682 206 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 GLRX3O76003 335 aaKnown RBP4.77□□□□□ -1.65
APAF1-208ENST00000549007 LCP1P13796 627 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 IFNGR1P15260 489 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 GUCY1A3Q02108 690 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 CDPF1Q6NVV7 123 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 FDX2Q6P4F2 183 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 MYO1HQ8N1T3 1032 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 PPM1KQ8N3J5 372 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 GSTCDQ8NEC7 633 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 USP7Q93009 1102 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 MYH16Q9H6N6 1097 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 IP6K2Q9UHH9 426 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 PCDHB12Q9Y5F1 795 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 COL18A1P39060 1754 aa4.77□□□□□ -1.65
APAF1-208ENST00000549007 LMO7Q8WWI1 1683 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 ARNTLO00327 626 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 SNRPNP63162 240 aaKnown RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 RALBP1Q15311 655 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 CDCA2Q69YH5 1023 aaPredicted RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 FMR1NBQ8N0W7 255 aaPredicted RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 IGSF22Q8N9C0 903 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 TIFAQ96CG3 184 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 MAGEB10Q96LZ2 347 aaPredicted RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 SPOCK3Q9BQ16 436 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 DSCC1Q9BVC3 393 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 COL14A1Q05707 1796 aaKnown RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 ADCYAP1R1P41586 468 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 EPHB1P54762 984 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 PTPN21Q16825 1174 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 GORABQ5T7V8 394 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 MTDHQ86UE4 582 aaKnown RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 ARHGEF39Q8N4T4 335 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 WNK4Q96J92 1243 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 TTC1Q99614 292 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 RNF208Q9H0X6 261 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 SAMD15Q9P1V8 674 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 INSRP06213 1382 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 WDR17Q8IZU2 1322 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 H3BM21 787 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 OIP5O43482 229 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 CD3EP07766 207 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 HOXB4P17483 251 aaPredicted RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 DGKGP49619 791 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 IL2P60568 153 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 SRSF11Q05519 484 aaKnown RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 TRIM61Q5EBN2 209 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 LYPD4Q6UWN0 246 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 CCDC103Q8IW40 242 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 CACTIN-AS1Q8N1I8 211 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 KCTD13Q8WZ19 329 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 PTPRN2Q92932 1015 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 VWCEQ96DN2 955 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 RPS6KC1Q96S38 1066 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 IRX2Q9BZI1 471 aaPredicted RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 SEMA6CQ9H3T2 930 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 CYP4F12Q9HCS2 524 aa4.76□□□□□ -1.65
APAF1-208ENST00000549007 INTS7Q9NVH2 962 aaKnown RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 TPX2Q9ULW0 747 aaKnown RBP4.76□□□□□ -1.65
APAF1-208ENST00000549007 RGPD2P0DJD1 1756 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 CDK12Q9NYV4 1490 aaPredicted RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 CCDC163A0A0D9SF12 145 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 LCHNA4D1U4 455 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 WASH4PA8MWX3 477 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 PRR33A8MZF0 331 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 KCNK3O14649 394 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 U2AF1L5P0DN76 240 aaPredicted RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 NAT2P11245 290 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 IL13P35225 146 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 IGFALSP35858 605 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 GABREP78334 506 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 U2AF1Q01081 240 aaKnown RBP eCLIP4.75□□□□□ -1.65
APAF1-208ENST00000549007 SULT6B1Q6IMI4 303 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 TMED8Q6PL24 325 aaPredicted RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 ZBTB46Q86UZ6 589 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 CHPFQ8IZ52 775 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 C8orf48Q96LL4 319 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms