RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SPZ1Q9BXG8 430 aa20.14■□□□□ 0.81
CHMP1A-205ENST00000548650 HDAC6Q9UBN7 1215 aa20.14■□□□□ 0.81
CHMP1A-205ENST00000548650 GGPS1O95749 300 aa20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 SP2Q02086 613 aa20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 KIAA0753Q2KHM9 967 aa20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 HSDL1Q3SXM5 330 aa20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 CELF3Q5SZQ8 465 aaKnown RBP20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 C7orf31Q8N865 590 aa20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 ZFP91Q96JP5 570 aaPredicted RBP20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 MAP3K14Q99558 947 aa20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 ALG1Q9BT22 464 aa20.13■□□□□ 0.81
CHMP1A-205ENST00000548650 SH2B2O14492 632 aaPredicted RBP20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 PRC1O43663 620 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 SORBS3O60504 671 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 SELPP16109 830 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 GPNMBQ14956 572 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 LRRC8DQ7L1W4 858 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 CTCFLQ8NI51 663 aaPredicted RBP20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 PIBF1Q8WXW3 757 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 SPATA33Q96N06 139 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 ESYT1Q9BSJ8 1104 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 MTA3Q9BTC8 594 aa20.12■□□□□ 0.81
CHMP1A-205ENST00000548650 TRANK1O15050 2925 aa20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 BAIAP3O94812 1187 aa20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 CA3P07451 260 aa20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 TGFB3P10600 412 aa20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 WNT8BQ93098 351 aa20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 INPP4AQ96PE3 977 aaPredicted RBP20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 FTOQ9C0B1 505 aaKnown RBP eCLIP20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 PRDM6Q9NQX0 595 aa20.11■□□□□ 0.81
CHMP1A-205ENST00000548650 SLC27A2O14975 620 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 PPFIA4O75335 1185 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 PLEKHA8P1O95397 391 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 CKBP12277 381 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 KIF5BP33176 963 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 HIC1Q14526 733 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 TRIM71Q2Q1W2 868 aaKnown RBP20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 TRAF7Q6Q0C0 670 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 CASC1Q6TDU7 716 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 HERC6Q8IVU3 1022 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 PHOSPHO2Q8TCD6 241 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 C16orf70Q9BSU1 422 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 MICAL3Q7RTP6 2002 aa20.1■□□□□ 0.81
CHMP1A-205ENST00000548650 CXCL10P02778 98 aa20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 SMARCA1P28370 1054 aa20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 ICAM3P32942 547 aa20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 MCM5P33992 734 aa20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 SEMA3FQ13275 785 aa20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 PTK7Q13308 1070 aa20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 PPM1EQ8WY54 764 aa20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 RRP36Q96EU6 259 aaKnown RBP20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 TMEM87BQ96K49 555 aa20.09■□□□□ 0.81
CHMP1A-205ENST00000548650 PIK3CDO00329 1044 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 NBNO60934 754 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 STAM2O75886 525 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 ARHGEF15O94989 841 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 RXRAP19793 462 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 IGFBP4P22692 258 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 WDR5P61964 334 aaKnown RBP20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 ZNF200P98182 395 aaPredicted RBP20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 TCTN1Q2MV58 587 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 GNPTABQ3T906 1256 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 CREB3L3Q68CJ9 461 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 BCAS3Q9H6U6 928 aa20.08■□□□□ 0.81
CHMP1A-205ENST00000548650 PRRC2BQ5JSZ5 2229 aaKnown RBP20.08■□□□□ 0.8
CHMP1A-205ENST00000548650 RBAK-RBAKDNI3L0D1 243 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 MEIS2O14770 477 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 PARNO95453 639 aaKnown RBP20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 LGALS2P05162 132 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 HOXC8P31273 242 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 MBTPS1Q14703 1052 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 NECTIN1Q15223 517 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 CNKSR3Q6P9H4 555 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 USP17L6PQ6QN14 398 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 NFXL1Q6ZNB6 911 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 SKAP1Q86WV1 359 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 SRBD1Q8N5C6 995 aaKnown RBP20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 LZTS2Q9BRK4 669 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 MLXIPQ9HAP2 919 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 ANO2Q9NQ90 1003 aa20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 SEC63Q9UGP8 760 aaKnown RBP20.07■□□□□ 0.8
CHMP1A-205ENST00000548650 CCDC69A6NI79 296 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 SPATA31C2B4DYI2 1134 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 FIBPO43427 364 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 LIFRP42702 1097 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 KCNJ6P48051 423 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 GNAQP50148 359 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 BMP2KLQ5H9B9 411 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 TJAP1Q5JTD0 557 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 PCNX4Q63HM2 1172 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 METTL7BQ6UX53 244 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 SERINC5Q86VE9 423 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 CMTR1Q8N1G2 835 aaKnown RBP20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 SMARCC2Q8TAQ2 1214 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 THEGQ9P2T0 379 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 SIP14410 1827 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 REV3LO60673 3130 aa20.06■□□□□ 0.8
CHMP1A-205ENST00000548650 EPOPA6NHQ4 379 aa20.05■□□□□ 0.8
CHMP1A-205ENST00000548650 DEFB103AP81534 67 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms