RNA–Protein interactions for RNA: ENST00000546907.1

TPCN1-208, Transcript of two pore segment channel 1, humanhuman

TSL 4

Gene TPCN1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-208ENST00000546907 CELF3Q5SZQ8 465 aaKnown RBP17.51■□□□□ 0.39
TPCN1-208ENST00000546907 NFXL1Q6ZNB6 911 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 CENPQQ7L2Z9 268 aaPredicted RBP17.51■□□□□ 0.39
TPCN1-208ENST00000546907 TMTC2Q8N394 836 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 CAGE1Q8TC20 777 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 RRP36Q96EU6 259 aaKnown RBP17.51■□□□□ 0.39
TPCN1-208ENST00000546907 LZTS2Q9BRK4 669 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 KATNAL1Q9BW62 490 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 NKX2-4Q9H2Z4 354 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 GTF2IRD1Q9UHL9 959 aa17.51■□□□□ 0.39
TPCN1-208ENST00000546907 PRRC2BQ5JSZ5 2229 aaKnown RBP17.51■□□□□ 0.39
TPCN1-208ENST00000546907 CCDC69A6NI79 296 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 HAS3O00219 553 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 SORBS3O60504 671 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 PLEKHA8P1O95397 391 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 ACTN1P12814 892 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 ATP2A2P16615 1042 aaKnown RBP17.5■□□□□ 0.39
TPCN1-208ENST00000546907 LIFRP42702 1097 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 GNAQP50148 359 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 RABGGTBP53611 331 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 SP2Q02086 613 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 MFSD10Q14728 455 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 KIAA0753Q2KHM9 967 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 HSDL1Q3SXM5 330 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 SKAP1Q86WV1 359 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 C7orf31Q8N865 590 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 AFAP1L1Q8TED9 768 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 DHX38Q92620 1227 aaKnown RBP17.5■□□□□ 0.39
TPCN1-208ENST00000546907 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
TPCN1-208ENST00000546907 ZFP91Q96JP5 570 aaPredicted RBP17.5■□□□□ 0.39
TPCN1-208ENST00000546907 SPATA33Q96N06 139 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 ALG1Q9BT22 464 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 SLC28A3Q9HAS3 691 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 HDAC6Q9UBN7 1215 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 SEC63Q9UGP8 760 aaKnown RBP17.5■□□□□ 0.39
TPCN1-208ENST00000546907 BDP1A6H8Y1 2624 aa17.5■□□□□ 0.39
TPCN1-208ENST00000546907 PPFIA4O75335 1185 aa17.49■□□□□ 0.39
TPCN1-208ENST00000546907 MRPS9P82933 396 aaKnown RBP17.49■□□□□ 0.39
TPCN1-208ENST00000546907 RBL2Q08999 1139 aa17.49■□□□□ 0.39
TPCN1-208ENST00000546907 GNPTABQ3T906 1256 aa17.49■□□□□ 0.39
TPCN1-208ENST00000546907 SRBD1Q8N5C6 995 aaKnown RBP17.49■□□□□ 0.39
TPCN1-208ENST00000546907 GAS2L1Q99501 681 aaPredicted RBP17.49■□□□□ 0.39
TPCN1-208ENST00000546907 FTOQ9C0B1 505 aaKnown RBP eCLIP17.49■□□□□ 0.39
TPCN1-208ENST00000546907 PCDHA11Q9Y5I1 949 aa17.49■□□□□ 0.39
TPCN1-208ENST00000546907 MICAL3Q7RTP6 2002 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 STAM2O75886 525 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 CALM1P0DP23 149 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 CALM2P0DP24 149 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 CALM3P0DP25 149 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 RXRAP19793 462 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 CUL5Q93034 780 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 INPP4AQ96PE3 977 aaPredicted RBP17.48■□□□□ 0.39
TPCN1-208ENST00000546907 LRRC2Q9BYS8 371 aa17.48■□□□□ 0.39
TPCN1-208ENST00000546907 BRWD1Q9NSI6 2320 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 PIK3CDO00329 1044 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 MEIS2O14770 477 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 MYOGP15173 224 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 SELPP16109 830 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 ICAM3P32942 547 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 LRRC8DQ7L1W4 858 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 SGMS1Q86VZ5 419 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 SMARCC2Q8TAQ2 1214 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 SLC9A7Q96T83 725 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 COL25A1Q9BXS0 654 aaPredicted RBP17.47■□□□□ 0.39
TPCN1-208ENST00000546907 MLXIPQ9HAP2 919 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 SLC12A7Q9Y666 1083 aa17.47■□□□□ 0.39
TPCN1-208ENST00000546907 CKBP12277 381 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 SEMA3FQ13275 785 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 PTK7Q13308 1070 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 GPNMBQ14956 572 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 TRIM71Q2Q1W2 868 aaKnown RBP17.46■□□□□ 0.39
TPCN1-208ENST00000546907 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 PCNX4Q63HM2 1172 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 PPP2R2DQ66LE6 453 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 TMTC3Q6ZXV5 915 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 RAB11FIP4Q86YS3 637 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 CMTR1Q8N1G2 835 aaKnown RBP17.46■□□□□ 0.39
TPCN1-208ENST00000546907 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 BCAS3Q9H6U6 928 aa17.46■□□□□ 0.39
TPCN1-208ENST00000546907 MUC3AQ02505 3323 aa17.46■□□□□ 0.38
TPCN1-208ENST00000546907 SPATA31C2B4DYI2 1134 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 FIBPO43427 364 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 BAIAP3O94812 1187 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 PARNO95453 639 aaKnown RBP17.45■□□□□ 0.38
TPCN1-208ENST00000546907 ADGRE1Q14246 886 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 NEDD9Q14511 834 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 METTL7BQ6UX53 244 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 MICU3Q86XE3 530 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 FANCBQ8NB91 859 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 PHOSPHO2Q8TCD6 241 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 WNT8BQ93098 351 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 RTEL1Q9NZ71 1219 aa17.45■□□□□ 0.38
TPCN1-208ENST00000546907 NOP56O00567 594 aaKnown RBP17.44■□□□□ 0.38
TPCN1-208ENST00000546907 CXCL10P02778 98 aa17.44■□□□□ 0.38
TPCN1-208ENST00000546907 LGALS2P05162 132 aa17.44■□□□□ 0.38
TPCN1-208ENST00000546907 ZNF200P98182 395 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms