RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 CIITAP33076 1130 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 GJA9P57773 515 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 SP2Q02086 613 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 PIK3AP1Q6ZUJ8 805 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 TLK2Q86UE8 772 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 COPS5Q92905 334 aa23.68■■□□□ 1.38
SCARB1-211ENST00000546215 UPF3AQ9H1J1 476 aaKnown RBP23.68■■□□□ 1.38
SCARB1-211ENST00000546215 MEIS1O00470 390 aa23.67■■□□□ 1.38
SCARB1-211ENST00000546215 DYNC1LI2O43237 492 aaPredicted RBP23.67■■□□□ 1.38
SCARB1-211ENST00000546215 ZNF76P36508 570 aa23.67■■□□□ 1.38
SCARB1-211ENST00000546215 NKX3-2P78367 333 aa23.67■■□□□ 1.38
SCARB1-211ENST00000546215 INF2Q27J81 1249 aa23.67■■□□□ 1.38
SCARB1-211ENST00000546215 LARP1BQ659C4 914 aaKnown RBP23.67■■□□□ 1.38
SCARB1-211ENST00000546215 FOXP1Q9H334 677 aaPredicted RBP23.67■■□□□ 1.38
SCARB1-211ENST00000546215 FAM205CA6NFA0 338 aa23.66■■□□□ 1.38
SCARB1-211ENST00000546215 MAFGO15525 162 aa23.66■■□□□ 1.38
SCARB1-211ENST00000546215 MNX1P50219 401 aaPredicted RBP23.66■■□□□ 1.38
SCARB1-211ENST00000546215 IRX5P78411 483 aaPredicted RBP23.66■■□□□ 1.38
SCARB1-211ENST00000546215 MTMR1Q13613 665 aa23.66■■□□□ 1.38
SCARB1-211ENST00000546215 NIPA1Q7RTP0 329 aa23.66■■□□□ 1.38
SCARB1-211ENST00000546215 IGLV3-22A0A075B6J6 115 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 CTAGE5O15320 804 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 UBA1P22314 1058 aaKnown RBP23.65■■□□□ 1.38
SCARB1-211ENST00000546215 LRRC41Q15345 812 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 ARRDC4Q8NCT1 418 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 KLHDC9Q8NEP7 349 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 CDHR1Q96JP9 859 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 KCNH7Q9NS40 1196 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 MYADML2A6NDP7 307 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 ANKLE1Q8NAG6 615 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 SENP7Q9BQF6 1050 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 AP5M1Q9H0R1 490 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 SPC25Q9HBM1 224 aa23.65■■□□□ 1.38
SCARB1-211ENST00000546215 CYP3A7-CYP3A51PA0A087WV96 503 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 KIF28PB7ZC32 967 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 H3BQV1 296 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 ATP9AO75110 1047 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 GH1P01241 217 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 C6orf222P0C671 652 aaPredicted RBP23.64■■□□□ 1.37
SCARB1-211ENST00000546215 ARP10275 920 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 CYP3A7P24462 503 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 U2AF2P26368 475 aaKnown RBP eCLIP23.64■■□□□ 1.373e-14■■■■□ 21.3
SCARB1-211ENST00000546215 ARHGAP1Q07960 439 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 IFFO2Q5TF58 517 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 NEK8Q86SG6 692 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 RNF180Q86T96 592 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 OR6J1Q8NGC5 347 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 LENG9Q96B70 501 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 BCAS3Q9H6U6 928 aa23.64■■□□□ 1.37
SCARB1-211ENST00000546215 DNM1LO00429 736 aa23.63■■□□□ 1.37
SCARB1-211ENST00000546215 HSP90AA1P07900 732 aaKnown RBP23.63■■□□□ 1.37
SCARB1-211ENST00000546215 KCNA2P16389 499 aa23.63■■□□□ 1.37
SCARB1-211ENST00000546215 CST5P28325 142 aaPredicted RBP23.63■■□□□ 1.37
SCARB1-211ENST00000546215 CELF3Q5SZQ8 465 aaKnown RBP23.63■■□□□ 1.37
SCARB1-211ENST00000546215 MYSM1Q5VVJ2 828 aa23.63■■□□□ 1.37
SCARB1-211ENST00000546215 CCSAPQ6IQ19 270 aaPredicted RBP23.63■■□□□ 1.37
SCARB1-211ENST00000546215 MOXD1Q6UVY6 613 aa23.63■■□□□ 1.37
SCARB1-211ENST00000546215 PLA2G4DQ86XP0 818 aa23.63■■□□□ 1.37
SCARB1-211ENST00000546215 EMID1Q96A84 441 aaPredicted RBP23.63■■□□□ 1.37
SCARB1-211ENST00000546215 GGPS1O95749 300 aa23.62■■□□□ 1.37
SCARB1-211ENST00000546215 MYCNP04198 464 aaPredicted RBP23.62■■□□□ 1.37
SCARB1-211ENST00000546215 PDCP20941 246 aa23.62■■□□□ 1.37
SCARB1-211ENST00000546215 NEDD9Q14511 834 aa23.62■■□□□ 1.37
SCARB1-211ENST00000546215 LETM2Q2VYF4 491 aa23.62■■□□□ 1.37
SCARB1-211ENST00000546215 PRR16Q569H4 304 aa23.62■■□□□ 1.37
SCARB1-211ENST00000546215 NOSTRINQ8IVI9 506 aa23.62■■□□□ 1.37
SCARB1-211ENST00000546215 DHX37Q8IY37 1157 aaKnown RBP23.62■■□□□ 1.37
SCARB1-211ENST00000546215 MBOAT7Q96N66 472 aa23.62■■□□□ 1.37
SCARB1-211ENST00000546215 AGO4Q9HCK5 861 aaKnown RBP23.62■■□□□ 1.37
SCARB1-211ENST00000546215 TDP2O95551 362 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 SYT1P21579 422 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 BEX3Q00994 111 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 SETQ01105 290 aaPredicted RBP23.61■■□□□ 1.37
SCARB1-211ENST00000546215 LAMC2Q13753 1193 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 FSCN1Q16658 493 aaKnown RBP23.61■■□□□ 1.37
SCARB1-211ENST00000546215 GNASQ5JWF2 1037 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 UBE2Q1Q7Z7E8 422 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 A6NJR5 290 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 GNL2Q13823 731 aaKnown RBP23.61■■□□□ 1.37
SCARB1-211ENST00000546215 KCNA10Q16322 511 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 Q4G0T1 1027 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 PPP4R3AQ6IN85 833 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 CYFIP1Q7L576 1253 aa23.61■■□□□ 1.37
SCARB1-211ENST00000546215 DIS3LQ8TF46 1054 aaKnown RBP23.61■■□□□ 1.37
SCARB1-211ENST00000546215 DOCK5Q9H7D0 1870 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 KBTBD13C9JR72 458 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 SORBS3O60504 671 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 FARP2O94887 1054 aaPredicted RBP23.6■■□□□ 1.37
SCARB1-211ENST00000546215 BECN1Q14457 450 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 MCTP1Q6DN14 999 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 METTL7BQ6UX53 244 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 SPRYD3Q8NCJ5 442 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 GIMAP8Q8ND71 665 aaPredicted RBP23.6■■□□□ 1.37
SCARB1-211ENST00000546215 AFG1LQ8WV93 481 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 TSEN34Q9BSV6 310 aaKnown RBP23.6■■□□□ 1.37
SCARB1-211ENST00000546215 MLXIPQ9HAP2 919 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 PKD2L1Q9P0L9 805 aa23.6■■□□□ 1.37
SCARB1-211ENST00000546215 WNT7AO00755 349 aa23.59■■□□□ 1.37
SCARB1-211ENST00000546215 CCNT1O60563 726 aaKnown RBP23.59■■□□□ 1.37
SCARB1-211ENST00000546215 CPT1AP50416 773 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms