RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PTGS1P23219 599 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 U2AF2P26368 475 aaKnown RBP eCLIP15.5■□□□□ 0.07
SP140-213ENST00000543928 ICAM3P32942 547 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 CIITAP33076 1130 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 SEMA3FQ13275 785 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 MTMR1Q13613 665 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 LY6KQ17RY6 165 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 DUSP28Q4G0W2 176 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 GJC2Q5T442 439 aaPredicted RBP15.5■□□□□ 0.07
SP140-213ENST00000543928 KCNV1Q6PIU1 500 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 NEK8Q86SG6 692 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 NOSTRINQ8IVI9 506 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 U2AF1L4Q8WU68 220 aaKnown RBP15.5■□□□□ 0.07
SP140-213ENST00000543928 COPS5Q92905 334 aa15.5■□□□□ 0.07
SP140-213ENST00000543928 DDX41Q9UJV9 622 aaKnown RBP15.5■□□□□ 0.07
SP140-213ENST00000543928 GNEQ9Y223 722 aaKnown RBP15.5■□□□□ 0.07
SP140-213ENST00000543928 IGLV3-22A0A075B6J6 115 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 MEIS1O00470 390 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 SGPL1O95470 568 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 TDP2O95551 362 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 TGFB3P10600 412 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 LETM2Q2VYF4 491 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 PRR16Q569H4 304 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 PLA2G4DQ86XP0 818 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 CDHR1Q96JP9 859 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 XPNPEP3Q9NQH7 507 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 TSHZ2Q9NRE2 1034 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 KCNH7Q9NS40 1196 aa15.49■□□□□ 0.07
SP140-213ENST00000543928 CCDC85CA6NKD9 419 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 NKRFO15226 690 aaKnown RBP eCLIP15.48■□□□□ 0.07
SP140-213ENST00000543928 MAFGO15525 162 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 STX6O43752 255 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 PGK1P00558 417 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 ARP10275 920 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 UBA1P22314 1058 aaKnown RBP15.48■□□□□ 0.07
SP140-213ENST00000543928 GJA8P48165 433 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 SP2Q02086 613 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 MOXD1Q6UVY6 613 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 NIPA1Q7RTP0 329 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 TLK2Q86UE8 772 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 CRISPLD2Q9H0B8 497 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 PKD2L1Q9P0L9 805 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 OGDHLQ9ULD0 1010 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
SP140-213ENST00000543928 FRMPD3Q5JV73 1810 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 SYNRGQ9UMZ2 1314 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 CYP3A7-CYP3A51PA0A087WV96 503 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 POTEFA5A3E0 1075 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 DYNC1LI2O43237 492 aaPredicted RBP15.47■□□□□ 0.07
SP140-213ENST00000543928 SORBS3O60504 671 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 CCNT1O60563 726 aaKnown RBP15.47■□□□□ 0.07
SP140-213ENST00000543928 ATP9AO75110 1047 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 GGPS1O95749 300 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 GH1P01241 217 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 TFRCP02786 760 aaKnown RBP15.47■□□□□ 0.07
SP140-213ENST00000543928 ATP2B1P20020 1258 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 CYP3A7P24462 503 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 GJA9P57773 515 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 SETQ01105 290 aaPredicted RBP15.47■□□□□ 0.07
SP140-213ENST00000543928 Q4G0T1 1027 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 FERMT3Q86UX7 667 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 OR6J1Q8NGC5 347 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 LENG9Q96B70 501 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 MBOAT7Q96N66 472 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 AP5M1Q9H0R1 490 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 SPC25Q9HBM1 224 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 AGO4Q9HCK5 861 aaKnown RBP15.47■□□□□ 0.07
SP140-213ENST00000543928 Q9Y3F1 56 aa15.47■□□□□ 0.07
SP140-213ENST00000543928 MYADML2A6NDP7 307 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 WNT7AO00755 349 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 ADAMTS4O75173 837 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 C6orf222P0C671 652 aaPredicted RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 GCFC2P16383 781 aaKnown RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 KCNA2P16389 499 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 IRX5P78411 483 aaPredicted RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 ARHGAP1Q07960 439 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 NEDD9Q14511 834 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 CELF3Q5SZQ8 465 aaKnown RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 MYSM1Q5VVJ2 828 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 PPP4R3AQ6IN85 833 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 UIMC1Q96RL1 719 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 NAP1L4Q99733 375 aaKnown RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 SENP7Q9BQF6 1050 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 UPF3AQ9H1J1 476 aaKnown RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 BCAS3Q9H6U6 928 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 MLXIPQ9HAP2 919 aa15.46■□□□□ 0.07
SP140-213ENST00000543928 DDX25Q9UHL0 483 aaKnown RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 NOL7Q9UMY1 257 aaKnown RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 RBM19Q9Y4C8 960 aaKnown RBP15.46■□□□□ 0.07
SP140-213ENST00000543928 BRCA2P51587 3418 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 CTAGE5O15320 804 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 MSH4O15457 936 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 SLC37A4O43826 429 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 TRAPPC10P48553 1259 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 SOX10P56693 466 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 BEX3Q00994 111 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 LAMC2Q13753 1193 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 LRRC41Q15345 812 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 FSCN1Q16658 493 aaKnown RBP15.45■□□□□ 0.06
SP140-213ENST00000543928 CYFIP1Q7L576 1253 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms