RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 TRIP12Q14669 1992 aaPredicted RBP23.05■■□□□ 1.28
DDX11-220ENST00000542244 PNMA6FA0A0J9YX94 578 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 GCOM1H8Y6P7 765 aaPredicted RBP23.04■■□□□ 1.28
DDX11-220ENST00000542244 NBNO60934 754 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 F2P00734 622 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 POLR2MP0CAP2 368 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 HOXD8P13378 290 aaPredicted RBP23.04■■□□□ 1.28
DDX11-220ENST00000542244 RFC2P35250 354 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 MRPS9P82933 396 aaKnown RBP23.04■■□□□ 1.28
DDX11-220ENST00000542244 SEMA3FQ13275 785 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 KIAA0753Q2KHM9 967 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 KRT40Q6A162 431 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 RAB11FIP4Q86YS3 637 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 CMTR1Q8N1G2 835 aaKnown RBP23.04■■□□□ 1.28
DDX11-220ENST00000542244 LSG1Q9H089 658 aaKnown RBP23.04■■□□□ 1.28
DDX11-220ENST00000542244 MYO9BQ13459 2157 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 MYH7BA7E2Y1 1941 aa23.04■■□□□ 1.28
DDX11-220ENST00000542244 PLEKHA8P1O95397 391 aa23.03■■□□□ 1.28
DDX11-220ENST00000542244 CKBP12277 381 aa23.03■■□□□ 1.28
DDX11-220ENST00000542244 RXRAP19793 462 aa23.03■■□□□ 1.28
DDX11-220ENST00000542244 BFSP2Q13515 415 aa23.03■■□□□ 1.28
DDX11-220ENST00000542244 MBTPS1Q14703 1052 aa23.03■■□□□ 1.28
DDX11-220ENST00000542244 SPATA33Q96N06 139 aa23.03■■□□□ 1.28
DDX11-220ENST00000542244 C16orf70Q9BSU1 422 aa23.03■■□□□ 1.28
DDX11-220ENST00000542244 OSBPL7Q9BZF2 842 aa23.03■■□□□ 1.28
DDX11-220ENST00000542244 ERICH2A1L162 156 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 SELPP16109 830 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 DEFB103AP81534 67 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 LRRC8DQ7L1W4 858 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 HERC6Q8IVU3 1022 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 ZNF654Q8IZM8 581 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 C7orf31Q8N865 590 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 RTEL1Q9NZ71 1219 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 REV3LO60673 3130 aa23.02■■□□□ 1.28
DDX11-220ENST00000542244 LCHNA4D1U4 455 aa23.01■■□□□ 1.27
DDX11-220ENST00000542244 CCND2P30279 289 aa23.01■■□□□ 1.27
DDX11-220ENST00000542244 RBL2Q08999 1139 aa23.01■■□□□ 1.27
DDX11-220ENST00000542244 USP17L6PQ6QN14 398 aa23.01■■□□□ 1.27
DDX11-220ENST00000542244 CATIPQ7Z7H3 387 aa23.01■■□□□ 1.27
DDX11-220ENST00000542244 MICALL1Q8N3F8 863 aa23.01■■□□□ 1.27
DDX11-220ENST00000542244 SRBD1Q8N5C6 995 aaKnown RBP23.01■■□□□ 1.27
DDX11-220ENST00000542244 AFAP1L1Q8TED9 768 aa23.01■■□□□ 1.27
DDX11-220ENST00000542244 MAP3K20Q9NYL2 800 aaKnown RBP23.01■■□□□ 1.27
DDX11-220ENST00000542244 hCG_1642624A0A1W2PR95 340 aa23■■□□□ 1.27
DDX11-220ENST00000542244 PRC1O43663 620 aa23■■□□□ 1.27
DDX11-220ENST00000542244 ACTN1P12814 892 aa23■■□□□ 1.27
DDX11-220ENST00000542244 WDR5P61964 334 aaKnown RBP23■■□□□ 1.27
DDX11-220ENST00000542244 TAP1Q03518 808 aa23■■□□□ 1.27
DDX11-220ENST00000542244 ZNF618Q5T7W0 954 aa23■■□□□ 1.27
DDX11-220ENST00000542244 CAGE1Q8TC20 777 aa23■■□□□ 1.27
DDX11-220ENST00000542244 LRRC2Q9BYS8 371 aa23■■□□□ 1.27
DDX11-220ENST00000542244 FRMPD4Q14CM0 1322 aa23■■□□□ 1.27
DDX11-220ENST00000542244 SH2B2O14492 632 aaPredicted RBP22.99■■□□□ 1.27
DDX11-220ENST00000542244 SLC27A2O14975 620 aa22.99■■□□□ 1.27
DDX11-220ENST00000542244 SLC9A7Q96T83 725 aa22.99■■□□□ 1.27
DDX11-220ENST00000542244 MEIS2O14770 477 aa22.98■■□□□ 1.27
DDX11-220ENST00000542244 PPFIA4O75335 1185 aa22.98■■□□□ 1.27
DDX11-220ENST00000542244 CXCL10P02778 98 aa22.98■■□□□ 1.27
DDX11-220ENST00000542244 SART3Q15020 963 aaKnown RBP22.98■■□□□ 1.27
DDX11-220ENST00000542244 TJAP1Q5JTD0 557 aa22.98■■□□□ 1.27
DDX11-220ENST00000542244 SAMD3Q8N6K7 520 aa22.98■■□□□ 1.27
DDX11-220ENST00000542244 ESYT1Q9BSJ8 1104 aa22.98■■□□□ 1.27
DDX11-220ENST00000542244 DOCK5Q9H7D0 1870 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 SPATA31C2B4DYI2 1134 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 PTK7Q13308 1070 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 TRIM50Q86XT4 487 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 PHOSPHO2Q8TCD6 241 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 ARNTL2Q8WYA1 636 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 INPP4AQ96PE3 977 aaPredicted RBP22.97■■□□□ 1.27
DDX11-220ENST00000542244 SPZ1Q9BXG8 430 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 MLXIPQ9HAP2 919 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 MTCH2Q9Y6C9 303 aa22.97■■□□□ 1.27
DDX11-220ENST00000542244 TTC28Q96AY4 2481 aa22.96■■□□□ 1.27
DDX11-220ENST00000542244 LGALS2P05162 132 aa22.96■■□□□ 1.27
DDX11-220ENST00000542244 NECTIN1Q15223 517 aa22.96■■□□□ 1.27
DDX11-220ENST00000542244 CREB3L3Q68CJ9 461 aa22.96■■□□□ 1.27
DDX11-220ENST00000542244 CYFIP1Q7L576 1253 aa22.96■■□□□ 1.27
DDX11-220ENST00000542244 CCDC155Q8N6L0 562 aa22.96■■□□□ 1.27
DDX11-220ENST00000542244 KATNAL1Q9BW62 490 aa22.96■■□□□ 1.27
DDX11-220ENST00000542244 THEGQ9P2T0 379 aa22.96■■□□□ 1.27
DDX11-220ENST00000542244 TREHO43280 583 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 DDAH1O94760 285 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 BAIAP3O94812 1187 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 SMIM10L2AP0DMW4 78 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 SMIM10L2BP0DMW5 78 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 TGFB3P10600 412 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 ICAM3P32942 547 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 TFF2Q03403 129 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 CNKSR3Q6P9H4 555 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 KCNV1Q6PIU1 500 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.95■■□□□ 1.26
DDX11-220ENST00000542244 CCDC82Q8N4S0 544 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 ASB2Q96Q27 587 aa22.95■■□□□ 1.26
DDX11-220ENST00000542244 H3BRB1 525 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 TLL1O43897 1013 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 LPXNO60711 386 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 HOXC8P31273 242 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 SP4Q02446 784 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 FAM117BQ6P1L5 589 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 SERINC5Q86VE9 423 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms