RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 AMNQ9BXJ7 453 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 CPVLQ9H3G5 476 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 COL20A1Q9P218 1284 aa14.28□□□□□ -0.12
SNHG1-216ENST00000541416 NEDD4P46934 1319 aa14.27□□□□□ -0.12
SNHG1-216ENST00000541416 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.27□□□□□ -0.13
SNHG1-216ENST00000541416 PRR33A8MZF0 331 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 RSPH10B2B2RC85 870 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 HAS3O00219 553 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 KDM4AO75164 1064 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 RSPH10BP0C881 870 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 ZNF286BP0CG31 522 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 TGFB3P10600 412 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 THPOP40225 353 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 CSPP1Q1MSJ5 1256 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 TIGD5Q53EQ6 642 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 SPRED2Q7Z698 418 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 MYOCDQ8IZQ8 938 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 ANKS1AQ92625 1134 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 MRPL38Q96DV4 380 aaKnown RBP14.27□□□□□ -0.13
SNHG1-216ENST00000541416 SPATA33Q96N06 139 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 ZSCAN10Q96SZ4 725 aaPredicted RBP14.27□□□□□ -0.13
SNHG1-216ENST00000541416 UBAC1Q9BSL1 405 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 VAT1LQ9HCJ6 419 aa14.27□□□□□ -0.13
SNHG1-216ENST00000541416 CAND2O75155 1236 aa14.26□□□□□ -0.13
SNHG1-216ENST00000541416 MYCLP12524 364 aaPredicted RBP14.26□□□□□ -0.13
SNHG1-216ENST00000541416 IMMTQ16891 758 aaKnown RBP14.26□□□□□ -0.13
SNHG1-216ENST00000541416 CELF3Q5SZQ8 465 aaKnown RBP14.26□□□□□ -0.13
SNHG1-216ENST00000541416 PTCRAQ6ISU1 281 aaPredicted RBP14.26□□□□□ -0.13
SNHG1-216ENST00000541416 FAM178BQ8IXR5 827 aa14.26□□□□□ -0.13
SNHG1-216ENST00000541416 SEPT8Q92599 483 aa14.26□□□□□ -0.13
SNHG1-216ENST00000541416 YME1L1Q96TA2 773 aa14.26□□□□□ -0.13
SNHG1-216ENST00000541416 KRT23Q9C075 422 aa14.26□□□□□ -0.13
SNHG1-216ENST00000541416 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
SNHG1-216ENST00000541416 MLXIPQ9HAP2 919 aa14.26□□□□□ -0.13
SNHG1-216ENST00000541416 MYH7BA7E2Y1 1941 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 C17orf102A2RUQ5 167 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 FAM86C2PA6NEL3 165 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 HIP1O00291 1037 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 GGPS1O95749 300 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 GNAT1P11488 350 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 HOXD8P13378 290 aaPredicted RBP14.25□□□□□ -0.13
SNHG1-216ENST00000541416 HSD17B4P51659 736 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 HTRA4P83105 476 aaPredicted RBP14.25□□□□□ -0.13
SNHG1-216ENST00000541416 TRIM71Q2Q1W2 868 aaKnown RBP14.25□□□□□ -0.13
SNHG1-216ENST00000541416 MYSM1Q5VVJ2 828 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 SERINC5Q86VE9 423 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 DBF4BQ8NFT6 615 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 ATP6V0A1Q93050 837 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 JMJD4Q9H9V9 463 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 DIAPH3Q9NSV4 1193 aa14.25□□□□□ -0.13
SNHG1-216ENST00000541416 B4E1Z4 1266 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 NOP56O00567 594 aaKnown RBP14.24□□□□□ -0.13
SNHG1-216ENST00000541416 NCK2O43639 380 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 SDSP20132 328 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 CCND2P30279 289 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 GHRHRQ02643 423 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 HDAC1Q13547 482 aaPredicted RBP14.24□□□□□ -0.13
SNHG1-216ENST00000541416 GNPTABQ3T906 1256 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 PLEKHG4Q58EX7 1191 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 IFIT1BQ5T764 474 aaKnown RBP14.24□□□□□ -0.13
SNHG1-216ENST00000541416 TRAF7Q6Q0C0 670 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.24□□□□□ -0.13
SNHG1-216ENST00000541416 STOX1Q6ZVD7 989 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 ENAHQ8N8S7 591 aaPredicted RBP14.24□□□□□ -0.13
SNHG1-216ENST00000541416 BANK1Q8NDB2 785 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.24□□□□□ -0.13
SNHG1-216ENST00000541416 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
SNHG1-216ENST00000541416 APBB2Q92870 758 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 PDCD2LQ9BRP1 358 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 C17orf80Q9BSJ5 609 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 C11orf16Q9NQ32 467 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 PCDHA1Q9Y5I3 950 aa14.24□□□□□ -0.13
SNHG1-216ENST00000541416 LAMA4Q16363 1823 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 GRXCR2A6NFK2 248 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 H3BRB1 525 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 ZBTB5O15062 677 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 ZNF200P98182 395 aaPredicted RBP14.23□□□□□ -0.13
SNHG1-216ENST00000541416 MBTPS1Q14703 1052 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 HSDL1Q3SXM5 330 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 EPC2Q52LR7 807 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 VSIG10LQ86VR7 867 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 KHSRPQ92945 711 aaKnown RBP eCLIP14.23□□□□□ -0.132e-12■■□□□ 11.6
SNHG1-216ENST00000541416 UIMC1Q96RL1 719 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 TUT1Q9H6E5 874 aaKnown RBP14.23□□□□□ -0.13
SNHG1-216ENST00000541416 ZSWIM5Q9P217 1185 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 PRKAG3Q9UGI9 489 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 MICAL3Q7RTP6 2002 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 BRWD1Q9NSI6 2320 aa14.23□□□□□ -0.13
SNHG1-216ENST00000541416 KLRF2D3W0D1 207 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 H3BNC9 293 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 GCOM1H8Y6P7 765 aaPredicted RBP14.22□□□□□ -0.13
SNHG1-216ENST00000541416 STAM2O75886 525 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 POLR2MP0CAP2 368 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 IL9P15248 144 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 UBA1P22314 1058 aaKnown RBP14.22□□□□□ -0.13
SNHG1-216ENST00000541416 GPM6BQ13491 265 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 PGM5Q15124 567 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 TCTN1Q2MV58 587 aa14.22□□□□□ -0.13
SNHG1-216ENST00000541416 CWC27Q6UX04 472 aaKnown RBP14.22□□□□□ -0.13
SNHG1-216ENST00000541416 EP400NLQ6ZTU2 488 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms