RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 RUFY2Q8WXA3 655 aa27.84■■■□□ 2.05
LEMD3-203ENST00000541171 SPATA33Q96N06 139 aa27.84■■■□□ 2.05
LEMD3-203ENST00000541171 UHRF1Q96T88 793 aaPredicted RBP27.84■■■□□ 2.05
LEMD3-203ENST00000541171 ZBED2Q9BTP6 218 aa27.84■■■□□ 2.05
LEMD3-203ENST00000541171 U3KPZ7 1027 aaPredicted RBP27.84■■■□□ 2.05
LEMD3-203ENST00000541171 ERICH2A1L162 156 aa27.83■■■□□ 2.05
LEMD3-203ENST00000541171 GCOM1H8Y6P7 765 aaPredicted RBP27.83■■■□□ 2.05
LEMD3-203ENST00000541171 HAS3O00219 553 aa27.83■■■□□ 2.05
LEMD3-203ENST00000541171 NBNO60934 754 aa27.83■■■□□ 2.05
LEMD3-203ENST00000541171 GGPS1O95749 300 aa27.83■■■□□ 2.05
LEMD3-203ENST00000541171 POLR2MP0CAP2 368 aa27.83■■■□□ 2.05
LEMD3-203ENST00000541171 TFF2Q03403 129 aa27.83■■■□□ 2.05
LEMD3-203ENST00000541171 MYSM1Q5VVJ2 828 aa27.83■■■□□ 2.05
LEMD3-203ENST00000541171 CNKSR3Q6P9H4 555 aa27.83■■■□□ 2.05
LEMD3-203ENST00000541171 DEFB103AP81534 67 aa27.82■■■□□ 2.04
LEMD3-203ENST00000541171 PTK7Q13308 1070 aa27.82■■■□□ 2.04
LEMD3-203ENST00000541171 HSDL1Q3SXM5 330 aa27.82■■■□□ 2.04
LEMD3-203ENST00000541171 CELF3Q5SZQ8 465 aaKnown RBP27.82■■■□□ 2.04
LEMD3-203ENST00000541171 KCNV1Q6PIU1 500 aa27.82■■■□□ 2.04
LEMD3-203ENST00000541171 SPRED2Q7Z698 418 aa27.82■■■□□ 2.04
LEMD3-203ENST00000541171 RALYLQ86SE5 291 aaKnown RBP27.82■■■□□ 2.04
LEMD3-203ENST00000541171 SAMD3Q8N6K7 520 aa27.82■■■□□ 2.04
LEMD3-203ENST00000541171 PIBF1Q8WXW3 757 aa27.82■■■□□ 2.04
LEMD3-203ENST00000541171 GPKOWQ92917 476 aaPredicted RBP eCLIP27.82■■■□□ 2.04
LEMD3-203ENST00000541171 RIOX1Q9H6W3 641 aa27.82■■■□□ 2.04
LEMD3-203ENST00000541171 PPFIA4O75335 1185 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 PARNO95453 639 aaKnown RBP27.81■■■□□ 2.04
LEMD3-203ENST00000541171 CCND2P30279 289 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 SP2Q02086 613 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 RBL2Q08999 1139 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 WTAPQ15007 396 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 TCTN1Q2MV58 587 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 WNT8BQ93098 351 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 MLXIPQ9HAP2 919 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 TAF6LQ9Y6J9 622 aa27.81■■■□□ 2.04
LEMD3-203ENST00000541171 PRRC2BQ5JSZ5 2229 aaKnown RBP27.81■■■□□ 2.04
LEMD3-203ENST00000541171 MYH7BA7E2Y1 1941 aa27.8■■■□□ 2.04
LEMD3-203ENST00000541171 LCHNA4D1U4 455 aa27.8■■■□□ 2.04
LEMD3-203ENST00000541171 CXCL10P02778 98 aa27.8■■■□□ 2.04
LEMD3-203ENST00000541171 POU3F3P20264 500 aaPredicted RBP27.8■■■□□ 2.04
LEMD3-203ENST00000541171 UBA1P22314 1058 aaKnown RBP27.8■■■□□ 2.04
LEMD3-203ENST00000541171 CHMLP26374 656 aa27.8■■■□□ 2.04
LEMD3-203ENST00000541171 TRAF1Q13077 416 aa27.8■■■□□ 2.04
LEMD3-203ENST00000541171 ZNF618Q5T7W0 954 aa27.8■■■□□ 2.04
LEMD3-203ENST00000541171 SUPT16HQ9Y5B9 1047 aaKnown RBP27.8■■■□□ 2.04
LEMD3-203ENST00000541171 E7EWF7 191 aa27.79■■■□□ 2.04
LEMD3-203ENST00000541171 CYTH3O43739 400 aa27.79■■■□□ 2.04
LEMD3-203ENST00000541171 HIC1Q14526 733 aa27.79■■■□□ 2.04
LEMD3-203ENST00000541171 SART3Q15020 963 aaKnown RBP27.79■■■□□ 2.04
LEMD3-203ENST00000541171 TRIM71Q2Q1W2 868 aaKnown RBP27.79■■■□□ 2.04
LEMD3-203ENST00000541171 NCOA7Q8NI08 942 aa27.79■■■□□ 2.04
LEMD3-203ENST00000541171 NECAB3Q96P71 396 aaPredicted RBP27.79■■■□□ 2.04
LEMD3-203ENST00000541171 BAZ2BQ9UIF8 2168 aaKnown RBP27.79■■■□□ 2.04
LEMD3-203ENST00000541171 PNMA6FA0A0J9YX94 578 aa27.78■■■□□ 2.04
LEMD3-203ENST00000541171 HOXD8P13378 290 aaPredicted RBP27.78■■■□□ 2.04
LEMD3-203ENST00000541171 GRB10Q13322 594 aa27.78■■■□□ 2.04
LEMD3-203ENST00000541171 BCAS3Q9H6U6 928 aa27.78■■■□□ 2.04
LEMD3-203ENST00000541171 ABHD14A-ACY1A0A1B0GW23 586 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 TGFB3P10600 412 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 BMP1P13497 986 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 KCNQ1P51787 676 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 TROAPQ12815 778 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 IKBKEQ14164 716 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 AAK1Q2M2I8 961 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 FAM117BQ6P1L5 589 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 TRAF7Q6Q0C0 670 aa27.77■■■□□ 2.04
LEMD3-203ENST00000541171 CATIPQ7Z7H3 387 aa27.76■■■□□ 2.03
LEMD3-203ENST00000541171 C16orf70Q9BSU1 422 aa27.76■■■□□ 2.03
LEMD3-203ENST00000541171 MTUS1Q9ULD2 1270 aa27.76■■■□□ 2.03
LEMD3-203ENST00000541171 THPOP40225 353 aa27.75■■■□□ 2.03
LEMD3-203ENST00000541171 MBTPS1Q14703 1052 aa27.75■■■□□ 2.03
LEMD3-203ENST00000541171 RAD9AQ99638 391 aa27.75■■■□□ 2.03
LEMD3-203ENST00000541171 RTEL1Q9NZ71 1219 aa27.75■■■□□ 2.03
LEMD3-203ENST00000541171 TCF20Q9UGU0 1960 aaKnown RBP27.75■■■□□ 2.03
LEMD3-203ENST00000541171 PTPRSQ13332 1948 aa27.75■■■□□ 2.03
LEMD3-203ENST00000541171 C17orf102A2RUQ5 167 aa27.74■■■□□ 2.03
LEMD3-203ENST00000541171 GJB5O95377 273 aa27.74■■■□□ 2.03
LEMD3-203ENST00000541171 GDPD5Q8WTR4 605 aa27.74■■■□□ 2.03
LEMD3-203ENST00000541171 ATP6V0A1Q93050 837 aa27.74■■■□□ 2.03
LEMD3-203ENST00000541171 TRANK1O15050 2925 aa27.74■■■□□ 2.03
LEMD3-203ENST00000541171 RSPH10B2B2RC85 870 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 H3BRB1 525 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 NOP56O00567 594 aaKnown RBP27.73■■■□□ 2.03
LEMD3-203ENST00000541171 SGSM2O43147 1006 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 LPXNO60711 386 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 EFCAB14O75071 495 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 LGR5O75473 907 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 LGALS2P05162 132 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 RSPH10BP0C881 870 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 ANTXR2P58335 489 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 IRX6P78412 446 aaPredicted RBP27.73■■■□□ 2.03
LEMD3-203ENST00000541171 MRPS9P82933 396 aaKnown RBP27.73■■■□□ 2.03
LEMD3-203ENST00000541171 GNPTABQ3T906 1256 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 SERINC5Q86VE9 423 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 IGDCC4Q8TDY8 1250 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 TUT1Q9H6E5 874 aaKnown RBP27.73■■■□□ 2.03
LEMD3-203ENST00000541171 REV3LO60673 3130 aa27.73■■■□□ 2.03
LEMD3-203ENST00000541171 MUC3AQ02505 3323 aa27.72■■■□□ 2.03
LEMD3-203ENST00000541171 SMIM10L2AP0DMW4 78 aa27.72■■■□□ 2.03
LEMD3-203ENST00000541171 SMIM10L2BP0DMW5 78 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms