RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 NIPA1Q7RTP0 329 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 TLK2Q86UE8 772 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 DHX37Q8IY37 1157 aaKnown RBP17.64■□□□□ 0.41
DDB1-218ENST00000540784 OR6J1Q8NGC5 347 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 CYP2W1Q8TAV3 490 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 TNFRSF25Q93038 417 aa17.64■□□□□ 0.41
DDB1-218ENST00000540784 FOXP1Q9H334 677 aaPredicted RBP17.64■□□□□ 0.41
DDB1-218ENST00000540784 MCM3APO60318 1980 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 GH1P01241 217 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 C6orf222P0C671 652 aaPredicted RBP17.63■□□□□ 0.41
DDB1-218ENST00000540784 CIITAP33076 1130 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 SP2Q02086 613 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 LAMC2Q13753 1193 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 INF2Q27J81 1249 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 GNASQ5JWF2 1037 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 MCTP1Q6DN14 999 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 PLA2G4DQ86XP0 818 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 ANKLE1Q8NAG6 615 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 COPS5Q92905 334 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 UPF3AQ9H1J1 476 aaKnown RBP17.63■□□□□ 0.41
DDB1-218ENST00000540784 MLXIPQ9HAP2 919 aa17.63■□□□□ 0.41
DDB1-218ENST00000540784 CENPFP49454 3210 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 FAM86B1E9PN63 330 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 EDIL3O43854 480 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 FAM86B2P0C5J1 330 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 ARP10275 920 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 PTGS1P23219 599 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 SEMA3FQ13275 785 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 NEDD9Q14511 834 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 LRRC41Q15345 812 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 LETM2Q2VYF4 491 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 PRR16Q569H4 304 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 CELF3Q5SZQ8 465 aaKnown RBP17.62■□□□□ 0.41
DDB1-218ENST00000540784 NEK8Q86SG6 692 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 GIMAP8Q8ND71 665 aaPredicted RBP17.62■□□□□ 0.41
DDB1-218ENST00000540784 NAP1L4Q99733 375 aaKnown RBP17.62■□□□□ 0.41
DDB1-218ENST00000540784 SENP7Q9BQF6 1050 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 KCNH7Q9NS40 1196 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 SYNRGQ9UMZ2 1314 aa17.62■□□□□ 0.41
DDB1-218ENST00000540784 CYP3A7-CYP3A51PA0A087WV96 503 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 KBTBD13C9JR72 458 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 DNM1LO00429 736 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 ZEB2O60315 1214 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 ATP9AO75110 1047 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 ADAMTS4O75173 837 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 GGPS1O95749 300 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 CYP3A7P24462 503 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 NKX3-2P78367 333 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 FSCN1Q16658 493 aaKnown RBP17.61■□□□□ 0.41
DDB1-218ENST00000540784 BRDTQ58F21 947 aaPredicted RBP17.61■□□□□ 0.41
DDB1-218ENST00000540784 EARS2Q5JPH6 523 aaKnown RBP17.61■□□□□ 0.41
DDB1-218ENST00000540784 MYSM1Q5VVJ2 828 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 PCSK9Q8NBP7 692 aaKnown RBP17.61■□□□□ 0.41
DDB1-218ENST00000540784 SPRYD3Q8NCJ5 442 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 KLHDC9Q8NEP7 349 aa17.61■□□□□ 0.41
DDB1-218ENST00000540784 TSEN34Q9BSV6 310 aaKnown RBP17.61■□□□□ 0.41
DDB1-218ENST00000540784 IGLV3-22A0A075B6J6 115 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 FAM205CA6NFA0 338 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 SORBS3O60504 671 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 CAPN15O75808 1086 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 UBA1P22314 1058 aaKnown RBP17.6■□□□□ 0.41
DDB1-218ENST00000540784 U2AF2P26368 475 aaKnown RBP eCLIP17.6■□□□□ 0.419e-8■■■■■ 32.2
DDB1-218ENST00000540784 CPT1AP50416 773 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 IRX5P78411 483 aaPredicted RBP17.6■□□□□ 0.41
DDB1-218ENST00000540784 BEX3Q00994 111 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 ARHGAP1Q07960 439 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 KCNA10Q16322 511 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 MOXD1Q6UVY6 613 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 CYFIP1Q7L576 1253 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 NOSTRINQ8IVI9 506 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 EMID1Q96A84 441 aaPredicted RBP17.6■□□□□ 0.41
DDB1-218ENST00000540784 AGO4Q9HCK5 861 aaKnown RBP17.6■□□□□ 0.41
DDB1-218ENST00000540784 PKD2L1Q9P0L9 805 aa17.6■□□□□ 0.41
DDB1-218ENST00000540784 MYADML2A6NDP7 307 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 A6NJR5 290 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 CTAGE5O15320 804 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 CCNT1O60563 726 aaKnown RBP17.59■□□□□ 0.41
DDB1-218ENST00000540784 FARP2O94887 1054 aaPredicted RBP17.59■□□□□ 0.41
DDB1-218ENST00000540784 KCNA2P16389 499 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 SYT1P21579 422 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 CST5P28325 142 aaPredicted RBP17.59■□□□□ 0.41
DDB1-218ENST00000540784 SETQ01105 290 aaPredicted RBP17.59■□□□□ 0.41
DDB1-218ENST00000540784 Q4G0T1 1027 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 PPP4R3AQ6IN85 833 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 NECAB2Q7Z6G3 386 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 AFG1LQ8WV93 481 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 PAWRQ96IZ0 340 aaKnown RBP17.59■□□□□ 0.41
DDB1-218ENST00000540784 SPATA33Q96N06 139 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 SDF4Q9BRK5 362 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 ZNF577Q9BSK1 485 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 BCAS3Q9H6U6 928 aa17.59■□□□□ 0.41
DDB1-218ENST00000540784 DDX25Q9UHL0 483 aaKnown RBP17.59■□□□□ 0.41
DDB1-218ENST00000540784 VPS37CA5D8V6 355 aaPredicted RBP17.58■□□□□ 0.4
DDB1-218ENST00000540784 KPNA6O60684 536 aa17.58■□□□□ 0.4
DDB1-218ENST00000540784 TDP2O95551 362 aa17.58■□□□□ 0.4
DDB1-218ENST00000540784 GCFC2P16383 781 aaKnown RBP17.58■□□□□ 0.4
DDB1-218ENST00000540784 ATP2B1P20020 1258 aa17.58■□□□□ 0.4
DDB1-218ENST00000540784 MNX1P50219 401 aaPredicted RBP17.58■□□□□ 0.4
DDB1-218ENST00000540784 CCSAPQ6IQ19 270 aaPredicted RBP17.58■□□□□ 0.4
DDB1-218ENST00000540784 METTL7BQ6UX53 244 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms