RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 NEFLP07196 543 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 TGFB3P10600 412 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 PBX2P40425 430 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 COL9A3Q14050 684 aaPredicted RBP10.39□□□□□ -0.75
LMO3-222ENST00000540445 PTGISQ16647 500 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 CELF3Q5SZQ8 465 aaKnown RBP10.39□□□□□ -0.75
LMO3-222ENST00000540445 USP17L6PQ6QN14 398 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 DHX32Q7L7V1 743 aaKnown RBP10.39□□□□□ -0.75
LMO3-222ENST00000540445 MICU3Q86XE3 530 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 C7orf31Q8N865 590 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 PPTC7Q8NI37 304 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 TCEANC2Q96MN5 208 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 SPATA33Q96N06 139 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 KATNAL1Q9BW62 490 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 PBX4Q9BYU1 374 aa10.39□□□□□ -0.75
LMO3-222ENST00000540445 CXXC1Q9P0U4 656 aaPredicted RBP10.39□□□□□ -0.75
LMO3-222ENST00000540445 NAP1L2Q9ULW6 460 aaPredicted RBP10.39□□□□□ -0.75
LMO3-222ENST00000540445 ZBBXA8MT70 800 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 PPFIA4O75335 1185 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 RGS20O76081 388 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 GGPS1O95749 300 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 PSEN2P49810 448 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 BFSP2Q13515 415 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 KRT32Q14532 448 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 GRIN2CQ14957 1233 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 GNPTABQ3T906 1256 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 MYSM1Q5VVJ2 828 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.38□□□□□ -0.75
LMO3-222ENST00000540445 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
LMO3-222ENST00000540445 IL31RAQ8NI17 732 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 EMID1Q96A84 441 aaPredicted RBP10.38□□□□□ -0.75
LMO3-222ENST00000540445 TIFAQ96CG3 184 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 FTOQ9C0B1 505 aaKnown RBP eCLIP10.38□□□□□ -0.75
LMO3-222ENST00000540445 ZNF576Q9H609 170 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 PSTPIP2Q9H939 334 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 VCANP13611 3396 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 MICAL3Q7RTP6 2002 aa10.38□□□□□ -0.75
LMO3-222ENST00000540445 NOP56O00567 594 aaKnown RBP10.37□□□□□ -0.75
LMO3-222ENST00000540445 ZBTB43O43298 467 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 STAM2O75886 525 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 HMGB1P09429 215 aaKnown RBP10.37□□□□□ -0.75
LMO3-222ENST00000540445 IQCF3P0C7M6 154 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 ZNF286BP0CG31 522 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 ACTN1P12814 892 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 FOSL2P15408 326 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 EXOSC10Q01780 885 aaKnown RBP10.37□□□□□ -0.75
LMO3-222ENST00000540445 SP2Q02086 613 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 MFSD10Q14728 455 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 KIAA0753Q2KHM9 967 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 ADCK5Q3MIX3 580 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 HSDL1Q3SXM5 330 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 TSGA10IPQ3SY00 556 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 GDF6Q6KF10 455 aaPredicted RBP10.37□□□□□ -0.75
LMO3-222ENST00000540445 HEATR3Q7Z4Q2 680 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 SESTD1Q86VW0 696 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 SGMS1Q86VZ5 419 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 RASEFQ8IZ41 740 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 CCDC155Q8N6L0 562 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 KAT2BQ92831 832 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 GPKOWQ92917 476 aaPredicted RBP eCLIP10.37□□□□□ -0.75
LMO3-222ENST00000540445 CTAGE1Q96RT6 745 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 RBM28Q9NW13 759 aaKnown RBP10.37□□□□□ -0.75
LMO3-222ENST00000540445 HDAC6Q9UBN7 1215 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 MSRAQ9UJ68 235 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 SLC4A7Q9Y6M7 1214 aa10.37□□□□□ -0.75
LMO3-222ENST00000540445 SPTBN5Q9NRC6 3674 aaKnown RBP10.37□□□□□ -0.75
LMO3-222ENST00000540445 SPDYE3A6NKU9 549 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 SPATA31C2B4DYI2 1134 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 PIK3CDO00329 1044 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 PITPNM1O00562 1244 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 MEIS2O14770 477 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 PFKMP08237 780 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 UBA1P22314 1058 aaKnown RBP10.36□□□□□ -0.75
LMO3-222ENST00000540445 MRPS9P82933 396 aaKnown RBP10.36□□□□□ -0.75
LMO3-222ENST00000540445 NEDD9Q14511 834 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 RTN1Q16799 776 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 PCNX4Q63HM2 1172 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 APOA5Q6Q788 366 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 TMTC3Q6ZXV5 915 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 CYFIP1Q7L576 1253 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 NLRX1Q86UT6 975 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 BRPF3Q9ULD4 1205 aa10.36□□□□□ -0.75
LMO3-222ENST00000540445 YBX2Q9Y2T7 364 aaKnown RBP10.36□□□□□ -0.75
LMO3-222ENST00000540445 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
LMO3-222ENST00000540445 MYH9P35579 1960 aaKnown RBP10.35□□□□□ -0.75
LMO3-222ENST00000540445 FRMPD4Q14CM0 1322 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 LOXHD1Q8IVV2 1947 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 KLF18A0A0U1RQI7 1052 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 H3BRB1 525 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 HAS3O00219 553 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 FIBPO43427 364 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 HOXD8P13378 290 aaPredicted RBP10.35□□□□□ -0.75
LMO3-222ENST00000540445 ICAM3P32942 547 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 RFC2P35250 354 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 SP4Q02446 784 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 RBL2Q08999 1139 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 RAB30Q15771 203 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 XRRA1Q6P2D8 792 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 USP38Q8NB14 1042 aa10.35□□□□□ -0.75
LMO3-222ENST00000540445 CAGE1Q8TC20 777 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms