RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 TGFB3P10600 412 aa21.97■■□□□ 1.11
TNFRSF1A-212ENST00000539372 EXOSC10Q01780 885 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1A-212ENST00000539372 HSDL1Q3SXM5 330 aa21.97■■□□□ 1.11
TNFRSF1A-212ENST00000539372 DHX32Q7L7V1 743 aaKnown RBP21.97■■□□□ 1.11
TNFRSF1A-212ENST00000539372 RETREG2Q8NC44 543 aa21.97■■□□□ 1.11
TNFRSF1A-212ENST00000539372 BCAS3Q9H6U6 928 aa21.97■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MLXIPQ9HAP2 919 aa21.97■■□□□ 1.11
TNFRSF1A-212ENST00000539372 HDAC6Q9UBN7 1215 aa21.97■■□□□ 1.11
TNFRSF1A-212ENST00000539372 TMEM265A0A087WTH1 108 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 PIK3CDO00329 1044 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 BFSP2Q13515 415 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 KIAA0753Q2KHM9 967 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 TSGA10IPQ3SY00 556 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 GNPTABQ3T906 1256 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 APOA5Q6Q788 366 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 SESTD1Q86VW0 696 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 C7orf31Q8N865 590 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CTAGE1Q96RT6 745 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 KATNAL1Q9BW62 490 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 PSTPIP2Q9H939 334 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 BRPF3Q9ULD4 1205 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 MYH7BA7E2Y1 1941 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 CDH23Q9H251 3354 aa21.96■■□□□ 1.11
TNFRSF1A-212ENST00000539372 ZBBXA8MT70 800 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 PITPNM1O00562 1244 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 PPFIA4O75335 1185 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 F2P00734 622 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 IQCF3P0C7M6 154 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 HOXD8P13378 290 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 GRIN2CQ14957 1233 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 UBE2SQ16763 222 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 HEATR3Q7Z4Q2 680 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 INPP4AQ96PE3 977 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 ZNF576Q9H609 170 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 GTF2IRD1Q9UHL9 959 aa21.95■■□□□ 1.1
TNFRSF1A-212ENST00000539372 HAS3O00219 553 aa21.94■■□□□ 1.1
TNFRSF1A-212ENST00000539372 STAM2O75886 525 aa21.94■■□□□ 1.1
TNFRSF1A-212ENST00000539372 SEMA3FQ13275 785 aa21.94■■□□□ 1.1
TNFRSF1A-212ENST00000539372 KRT32Q14532 448 aa21.94■■□□□ 1.1
TNFRSF1A-212ENST00000539372 PCNX4Q63HM2 1172 aa21.94■■□□□ 1.1
TNFRSF1A-212ENST00000539372 SLC4A7Q9Y6M7 1214 aa21.94■■□□□ 1.1
TNFRSF1A-212ENST00000539372 SPATA31C2B4DYI2 1134 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 ZBTB43O43298 467 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 PFKMP08237 780 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 CPA1P15085 419 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 ICAM3P32942 547 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 RABGGTBP53611 331 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 ZNF200P98182 395 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 SCN5AQ14524 2016 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 RTN1Q16799 776 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 CYFIP1Q7L576 1253 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 CNTNAP5Q8WYK1 1306 aa21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 DHX38Q92620 1227 aaKnown RBP21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 FTOQ9C0B1 505 aaKnown RBP eCLIP21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 RBM28Q9NW13 759 aaKnown RBP21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 NAP1L2Q9ULW6 460 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-212ENST00000539372 KLF18A0A0U1RQI7 1052 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 FIBPO43427 364 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 FOSL2P15408 326 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 RFC2P35250 354 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 RAB30Q15771 203 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 CCDC155Q8N6L0 562 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 CAGE1Q8TC20 777 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 C16orf70Q9BSU1 422 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 MSRAQ9UJ68 235 aa21.92■■□□□ 1.1
TNFRSF1A-212ENST00000539372 GOLGA8AA7E2F4 631 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 GOLGA8BA8MQT2 603 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 NOP56O00567 594 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 FGD1P98174 961 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 NEDD9Q14511 834 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 HIC1Q14526 733 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 WWC2Q6AWC2 1192 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 XRRA1Q6P2D8 792 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 METTL7BQ6UX53 244 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 MAFAQ8NHW3 353 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 AFAP1L1Q8TED9 768 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 JAKMIP1Q96N16 626 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 NKX2-4Q9H2Z4 354 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 YBX2Q9Y2T7 364 aaKnown RBP21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 TELO2Q9Y4R8 837 aa21.91■■□□□ 1.1
TNFRSF1A-212ENST00000539372 RBAK-RBAKDNI3L0D1 243 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 LGALS2P05162 132 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 HMGB1P09429 215 aaKnown RBP21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 ACTN1P12814 892 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 SELPP16109 830 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 ATP2A2P16615 1042 aaKnown RBP21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 SP4Q02446 784 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 NLRX1Q86UT6 975 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 KCNB2Q92953 911 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 SNX14Q9Y5W7 946 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 V9GY48 417 aaPredicted RBP21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 TANC1Q9C0D5 1861 aa21.9■■□□□ 1.1
TNFRSF1A-212ENST00000539372 SPDYE3A6NKU9 549 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 NEFLP07196 543 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 CKBP12277 381 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 MYOGP15173 224 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 CDC27P30260 824 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 HSPA4P34932 840 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 FUT2Q10981 343 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 LRRC8DQ7L1W4 858 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms