RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 FTOQ9C0B1 505 aaKnown RBP eCLIP14.52□□□□□ -0.09
VAMP1-206ENST00000538970 C11orf16Q9NQ32 467 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 HDAC6Q9UBN7 1215 aa14.52□□□□□ -0.09
VAMP1-206ENST00000538970 ERICH2A1L162 156 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 FAM86C2PA6NEL3 165 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 HAS3O00219 553 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 MYCLP12524 364 aaPredicted RBP14.51□□□□□ -0.09
VAMP1-206ENST00000538970 SELPP16109 830 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 UBA1P22314 1058 aaKnown RBP14.51□□□□□ -0.09
VAMP1-206ENST00000538970 TRAF1Q13077 416 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 MFSD10Q14728 455 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 GPNMBQ14956 572 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 WTAPQ15007 396 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 SART3Q15020 963 aaKnown RBP14.51□□□□□ -0.09
VAMP1-206ENST00000538970 MYSM1Q5VVJ2 828 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 KCNV1Q6PIU1 500 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 LRRC8DQ7L1W4 858 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 VSIG10LQ86VR7 867 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 HERC6Q8IVU3 1022 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 NCOA7Q8NI08 942 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 ALG1Q9BT22 464 aa14.51□□□□□ -0.09
VAMP1-206ENST00000538970 NCOR1O75376 2440 aa14.5□□□□□ -0.09
VAMP1-206ENST00000538970 GCOM1H8Y6P7 765 aaPredicted RBP14.5□□□□□ -0.09
VAMP1-206ENST00000538970 GGPS1O95749 300 aa14.5□□□□□ -0.09
VAMP1-206ENST00000538970 POLR2MP0CAP2 368 aa14.5□□□□□ -0.09
VAMP1-206ENST00000538970 ANTXR2P58335 489 aa14.5□□□□□ -0.09
VAMP1-206ENST00000538970 KIAA0753Q2KHM9 967 aa14.5□□□□□ -0.09
VAMP1-206ENST00000538970 HSDL1Q3SXM5 330 aa14.5□□□□□ -0.09
VAMP1-206ENST00000538970 TMEM31Q5JXX7 168 aa14.5□□□□□ -0.09
VAMP1-206ENST00000538970 CELF3Q5SZQ8 465 aaKnown RBP14.5□□□□□ -0.09
VAMP1-206ENST00000538970 MB21D2Q8IYB1 491 aaPredicted RBP14.5□□□□□ -0.09
VAMP1-206ENST00000538970 FRMPD4Q14CM0 1322 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 PNMA6FA0A0J9YX94 578 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 SORBS3O60504 671 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 NBNO60934 754 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 ARHGEF15O94989 841 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 PARNO95453 639 aaKnown RBP14.49□□□□□ -0.09
VAMP1-206ENST00000538970 CXCL10P02778 98 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 CKBP12277 381 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 CCND2P30279 289 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 KCNJ6P48051 423 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 WDR5P61964 334 aaKnown RBP14.49□□□□□ -0.09
VAMP1-206ENST00000538970 SP2Q02086 613 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 PTK7Q13308 1070 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 TRIM71Q2Q1W2 868 aaKnown RBP14.49□□□□□ -0.09
VAMP1-206ENST00000538970 TRAF7Q6Q0C0 670 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 CATIPQ7Z7H3 387 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 FCHSD1Q86WN1 690 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 GPKOWQ92917 476 aaPredicted RBP eCLIP14.49□□□□□ -0.09
VAMP1-206ENST00000538970 MAP4K1Q92918 833 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 WNT8BQ93098 351 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 ZFP91Q96JP5 570 aaPredicted RBP14.49□□□□□ -0.09
VAMP1-206ENST00000538970 SPATA33Q96N06 139 aa14.49□□□□□ -0.09
VAMP1-206ENST00000538970 TRANK1O15050 2925 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 EPOPA6NHQ4 379 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 PPFIA4O75335 1185 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 TGFB3P10600 412 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 IRX6P78412 446 aaPredicted RBP14.48□□□□□ -0.09
VAMP1-206ENST00000538970 TAP1Q03518 808 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 HIC1Q14526 733 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 TCTN1Q2MV58 587 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 CNKSR3Q6P9H4 555 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 IGDCC4Q8TDY8 1250 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 C16orf70Q9BSU1 422 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 CERS4Q9HA82 394 aa14.48□□□□□ -0.09
VAMP1-206ENST00000538970 RBM8AQ9Y5S9 174 aaKnown RBP14.48□□□□□ -0.09
VAMP1-206ENST00000538970 PTPRSQ13332 1948 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 KIF28PB7ZC32 967 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 RFXAPO00287 272 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 POU3F3P20264 500 aaPredicted RBP14.47□□□□□ -0.09
VAMP1-206ENST00000538970 DEFB103AP81534 67 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 ZNF200P98182 395 aaPredicted RBP14.47□□□□□ -0.09
VAMP1-206ENST00000538970 INPP4AQ96PE3 977 aaPredicted RBP14.47□□□□□ -0.09
VAMP1-206ENST00000538970 MAP3K14Q99558 947 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 SPZ1Q9BXG8 430 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 LY9Q9HBG7 655 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 MTCH2Q9Y6C9 303 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 TET1Q8NFU7 2136 aa14.47□□□□□ -0.09
VAMP1-206ENST00000538970 TLL1O43897 1013 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 DDAH1O94760 285 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 HOXC8P31273 242 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 MRPS9P82933 396 aaKnown RBP14.46□□□□□ -0.09
VAMP1-206ENST00000538970 MBTPS1Q14703 1052 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 SKIV2LQ15477 1246 aaKnown RBP14.46□□□□□ -0.09
VAMP1-206ENST00000538970 GNPTABQ3T906 1256 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 ZNF618Q5T7W0 954 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 SPRED2Q7Z698 418 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 TMCO2Q7Z6W1 182 aaPredicted RBP14.46□□□□□ -0.09
VAMP1-206ENST00000538970 ZNF654Q8IZM8 581 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 PIBF1Q8WXW3 757 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 ARNTL2Q8WYA1 636 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 MYL10Q9BUA6 226 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
VAMP1-206ENST00000538970 BCAS3Q9H6U6 928 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 MLXIPQ9HAP2 919 aa14.46□□□□□ -0.09
VAMP1-206ENST00000538970 COL4A4P53420 1690 aaPredicted RBP14.46□□□□□ -0.1
VAMP1-206ENST00000538970 ABHD14A-ACY1A0A1B0GW23 586 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 LCHNA4D1U4 455 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 RBAK-RBAKDNI3L0D1 243 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 GTPBP6O43824 516 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms