RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 PQBP1O60828 265 aaKnown RBP9.86□□□□□ -0.83
GGA3-202ENST00000538886 GTF2A1P52655 376 aaPredicted RBP9.86□□□□□ -0.83
GGA3-202ENST00000538886 SH3D19Q5HYK7 790 aa9.86□□□□□ -0.83
GGA3-202ENST00000538886 PPP4R3AQ6IN85 833 aa9.86□□□□□ -0.83
GGA3-202ENST00000538886 GLT1D1Q96MS3 346 aa9.86□□□□□ -0.83
GGA3-202ENST00000538886 RIOX1Q9H6W3 641 aa9.86□□□□□ -0.83
GGA3-202ENST00000538886 TTC12Q9H892 705 aaPredicted RBP9.86□□□□□ -0.83
GGA3-202ENST00000538886 FER1L6Q2WGJ9 1857 aa9.86□□□□□ -0.83
GGA3-202ENST00000538886 IGKV6D-41A0A0C4DH26 115 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 FAM155AB1AL88 458 aaPredicted RBP9.85□□□□□ -0.83
GGA3-202ENST00000538886 COBLO75128 1261 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 MMP1P03956 469 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 HARSP12081 509 aaKnown RBP9.85□□□□□ -0.83
GGA3-202ENST00000538886 ACVR2BQ13705 512 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 CAMK4Q16566 473 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 CXCL17Q6UXB2 119 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 SNX29Q8TEQ0 813 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 SCFD2Q8WU76 684 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 MTA3Q9BTC8 594 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 IPO5O00410 1097 aaKnown RBP9.85□□□□□ -0.83
GGA3-202ENST00000538886 CTSHP09668 335 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 FGRP09769 529 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 NT5C2P49902 561 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 CEP55Q53EZ4 464 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 SWSAP1Q6NVH7 229 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 RNF180Q86T96 592 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
GGA3-202ENST00000538886 TMEM62Q0P6H9 643 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 NFX1Q12986 1120 aaKnown RBP9.85□□□□□ -0.83
GGA3-202ENST00000538886 RILPL1Q5EBL4 403 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 AFG1LQ8WV93 481 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 APBA2Q99767 749 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 TEKT3Q9BXF9 490 aa9.85□□□□□ -0.83
GGA3-202ENST00000538886 RANBP17Q9H2T7 1088 aaKnown RBP9.85□□□□□ -0.83
GGA3-202ENST00000538886 SEPT9Q9UHD8 586 aaPredicted RBP9.85□□□□□ -0.83
GGA3-202ENST00000538886 PPP1R11O60927 126 aaPredicted RBP9.84□□□□□ -0.83
GGA3-202ENST00000538886 CTDNEP1O95476 244 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 TKFCQ3LXA3 575 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 MTERF2Q49AM1 385 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 METTL16Q86W50 562 aaKnown RBP9.84□□□□□ -0.83
GGA3-202ENST00000538886 C7orf31Q8N865 590 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 DHX58Q96C10 678 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 PDCD2LQ9BRP1 358 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 PCDHB6Q9Y5E3 794 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 WDR19Q8NEZ3 1342 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 SLC15A5A6NIM6 579 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 UNCXA6NJT0 531 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 GOLGA6L6A8MZA4 724 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 ZEB2O60315 1214 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 KINO60870 393 aaKnown RBP9.84□□□□□ -0.83
GGA3-202ENST00000538886 F13A1P00488 732 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 ALDH5A1P51649 535 aaPredicted RBP9.84□□□□□ -0.83
GGA3-202ENST00000538886 MAP3K10Q02779 954 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 CTTNQ14247 550 aaKnown RBP9.84□□□□□ -0.83
GGA3-202ENST00000538886 XKR9Q5GH70 373 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 C17orf99Q6UX52 265 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 TRIM50Q86XT4 487 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 BANK1Q8NDB2 785 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 IL31RAQ8NI17 732 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 NPLOC4Q8TAT6 608 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 ZNF592Q92610 1267 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 C12orf42Q96LP6 360 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 ABHD16BQ9H3Z7 469 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 RIC8AQ9NPQ8 531 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 ROBO3Q96MS0 1386 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 LOC102724159A0A0B4J2E5 919 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 POTEMA6NI47 508 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 ZBBXA8MT70 800 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 FDPSP14324 419 aaKnown RBP9.84□□□□□ -0.83
GGA3-202ENST00000538886 PWP2Q15269 919 aaKnown RBP9.84□□□□□ -0.83
GGA3-202ENST00000538886 TPD52L1Q16890 204 aaPredicted RBP9.84□□□□□ -0.83
GGA3-202ENST00000538886 PRIMPOLQ96LW4 560 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 CLIC6Q96NY7 704 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 PCDH10Q9P2E7 1040 aa9.84□□□□□ -0.83
GGA3-202ENST00000538886 SYCE3A1L190 88 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 CCDC169A6NNP5 214 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 SPTLC2O15270 562 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 ZNF286BP0CG31 522 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 FAM117BQ6P1L5 589 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 POTEDQ86YR6 584 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 CEP57L1Q8IYX8 460 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 PIGOQ8TEQ8 1089 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 SNX21Q969T3 373 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 HHIPL1Q96JK4 782 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 CDHR1Q96JP9 859 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 PXMP2Q9NR77 195 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 KCNH7Q9NS40 1196 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 EIF3JO75822 258 aaKnown RBP9.83□□□□□ -0.84
GGA3-202ENST00000538886 HMGCRP04035 888 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 MYSM1Q5VVJ2 828 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 FSIP1Q8NA03 581 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 CCDC47Q96A33 483 aaKnown RBP9.83□□□□□ -0.84
GGA3-202ENST00000538886 UNC93B1Q9H1C4 597 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 RBSNQ9H1K0 784 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 ZSCAN16Q9H4T2 348 aaPredicted RBP9.83□□□□□ -0.84
GGA3-202ENST00000538886 STARD7Q9NQZ5 370 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 AKT3Q9Y243 479 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 ARP10275 920 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 GTF2F1P35269 517 aaKnown RBP eCLIP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms