RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 GRM4Q14833 912 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 POTEBQ6S5H4 581 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 TMCO2Q7Z6W1 182 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 MB21D2Q8IYB1 491 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 SAMD3Q8N6K7 520 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 OR6J1Q8NGC5 347 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 NSUN6Q8TEA1 469 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 COPS5Q92905 334 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 MPHOSPH6Q99547 160 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 VAT1LQ9HCJ6 419 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-203ENST00000534830 PTPRSQ13332 1948 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 CYTH3O43739 400 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 BAIAP3O94812 1187 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 MYL3P08590 195 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 PPP2R5BQ15173 497 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 PUS10Q3MIT2 529 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 EP400NLQ6ZTU2 488 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 NCOA7Q8NI08 942 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 PPP1R13LQ8WUF5 828 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 MFSD14AQ96MC6 490 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 TGS1Q96RS0 853 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 RMDN3Q96TC7 470 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 AMNQ9BXJ7 453 aa11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 GPHNQ9NQX3 736 aaPredicted RBP11.7□□□□□ -0.54
CLSTN3-203ENST00000534830 H3BQ06 376 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 PITPNM1O00562 1244 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 IFIT3O14879 490 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 KPNA6O60684 536 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 TXNP10599 105 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 WDR5P61964 334 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 BFSP2Q13515 415 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 STXBP2Q15833 593 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 MAP3K14Q99558 947 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 MTG1Q9BT17 334 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 MTA3Q9BTC8 594 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 LSG1Q9H089 658 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 PXMP2Q9NR77 195 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 RBM8AQ9Y5S9 174 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 TANC1Q9C0D5 1861 aa11.69□□□□□ -0.54
CLSTN3-203ENST00000534830 CFAP54Q96N23 3096 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 EIF3JO75822 258 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 RGS20O76081 388 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 CFBP00751 764 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 NR3C2P08235 984 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 ERVK-21P61565 698 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 DEFB103AP81534 67 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 PTPN11Q06124 597 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 ARHGAP1Q07960 439 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 COL9A3Q14050 684 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 WTAPQ15007 396 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 LY6KQ17RY6 165 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 CHST3Q7LGC8 479 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 EMID1Q96A84 441 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 RAD9AQ99638 391 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 LY9Q9HBG7 655 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 DDX41Q9UJV9 622 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 NOD1Q9Y239 953 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 FAM50BQ9Y247 325 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 PCDHA1Q9Y5I3 950 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 USP34Q70CQ2 3546 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 ZDBF2Q9HCK1 2354 aa11.68□□□□□ -0.54
CLSTN3-203ENST00000534830 SIP14410 1827 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 PNMA6FA0A0J9YX94 578 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 ERICH2A1L162 156 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 LINC01553A4QN01 128 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 DHX16O60231 1041 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 MMP3P08254 477 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 EIF2AK2P19525 551 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 CHMP4BP1P59074 171 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 ZP2Q05996 745 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 BRDTQ58F21 947 aaPredicted RBP11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 ARHGEF16Q5VV41 709 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 FAM117BQ6P1L5 589 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 SEPT14Q6ZU15 432 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 RALYLQ86SE5 291 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 VSIG10LQ86VR7 867 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 SESTD1Q86VW0 696 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 NEK9Q8TD19 979 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 KAT2BQ92831 832 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 PIGSQ96S52 555 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 PDCD2LQ9BRP1 358 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 ESYT1Q9BSJ8 1104 aa11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 UPF3BQ9BZI7 483 aaKnown RBP11.67□□□□□ -0.54
CLSTN3-203ENST00000534830 GJB5O95377 273 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 GH1P01241 217 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 HOXD8P13378 290 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 SMARCA1P28370 1054 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 PTPN5P54829 565 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 SART3Q15020 963 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 PGM5Q15124 567 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 FBXO22Q8NEZ5 403 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 PRSS33Q8NF86 280 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 AFG1LQ8WV93 481 aa11.66□□□□□ -0.54
CLSTN3-203ENST00000534830 CTAGE1Q96RT6 745 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms