RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 STOX1Q6ZVD7 989 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 DHX37Q8IY37 1157 aaKnown RBP14.56□□□□□ -0.08
USF1-211ENST00000534633 DHX38Q92620 1227 aaKnown RBP14.56□□□□□ -0.08
USF1-211ENST00000534633 PDCD2LQ9BRP1 358 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 CERS4Q9HA82 394 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 HDAC6Q9UBN7 1215 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 MAD2L2Q9UI95 211 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 TAF6LQ9Y6J9 622 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 BDP1A6H8Y1 2624 aa14.56□□□□□ -0.08
USF1-211ENST00000534633 KAT6AQ92794 2004 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 PALM3A6NDB9 673 aaPredicted RBP14.55□□□□□ -0.08
USF1-211ENST00000534633 EPOPA6NHQ4 379 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 PPP1R11O60927 126 aaPredicted RBP14.55□□□□□ -0.08
USF1-211ENST00000534633 PPFIA4O75335 1185 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 CDC45O75419 566 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 ARHGEF15O94989 841 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 ZNF286BP0CG31 522 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 CKBP12277 381 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 HOXD8P13378 290 aaPredicted RBP14.55□□□□□ -0.08
USF1-211ENST00000534633 GPNMBQ14956 572 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 SKIV2LQ15477 1246 aaKnown RBP14.55□□□□□ -0.08
USF1-211ENST00000534633 KIAA0753Q2KHM9 967 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 MYSM1Q5VVJ2 828 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 CYB5R4Q7L1T6 521 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 ARNTL2Q8WYA1 636 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 ALG1Q9BT22 464 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 PCDHA1Q9Y5I3 950 aa14.55□□□□□ -0.08
USF1-211ENST00000534633 NBNO60934 754 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 EFCAB14O75071 495 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 RGS20O76081 388 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 TGFB3P10600 412 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 MYCLP12524 364 aaPredicted RBP14.54□□□□□ -0.08
USF1-211ENST00000534633 BMP1P13497 986 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 TRDNQ13061 729 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 PTK7Q13308 1070 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 PGM5Q15124 567 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 VSIG10LQ86VR7 867 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 RIOX1Q9H6W3 641 aa14.54□□□□□ -0.08
USF1-211ENST00000534633 ABHD14A-ACY1A0A1B0GW23 586 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 CYP21A2P08686 494 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 HOXA13P31271 388 aaPredicted RBP14.53□□□□□ -0.08
USF1-211ENST00000534633 DEFB103AP81534 67 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 TFF2Q03403 129 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 GRM4Q14833 912 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 TRIM71Q2Q1W2 868 aaKnown RBP14.53□□□□□ -0.08
USF1-211ENST00000534633 CELF3Q5SZQ8 465 aaKnown RBP14.53□□□□□ -0.08
USF1-211ENST00000534633 SPATA33Q96N06 139 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 ZBED2Q9BTP6 218 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 COG5Q9UP83 839 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 GTF3C3Q9Y5Q9 886 aa14.53□□□□□ -0.08
USF1-211ENST00000534633 ERICH2A1L162 156 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 GCOM1H8Y6P7 765 aaPredicted RBP14.52□□□□□ -0.09
USF1-211ENST00000534633 GJB5O95377 273 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 GGPS1O95749 300 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 POLR2MP0CAP2 368 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 CCND2P30279 289 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 GRB10Q13322 594 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 IKBKEQ14164 716 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 NECTIN1Q15223 517 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 HSDL1Q3SXM5 330 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 ZNF618Q5T7W0 954 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 KRT40Q6A162 431 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 HOMER1Q86YM7 354 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 IL31RAQ8NI17 732 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 PIGSQ96S52 555 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 LMCD1Q9NZU5 365 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 RBM8AQ9Y5S9 174 aaKnown RBP14.52□□□□□ -0.09
USF1-211ENST00000534633 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
USF1-211ENST00000534633 NLRC5Q86WI3 1866 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 BRWD1Q9NSI6 2320 aa14.52□□□□□ -0.09
USF1-211ENST00000534633 EMSYQ7Z589 1322 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 LCHNA4D1U4 455 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 IFIT3O14879 490 aaKnown RBP14.51□□□□□ -0.09
USF1-211ENST00000534633 COL9A1P20849 921 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 UBA1P22314 1058 aaKnown RBP14.51□□□□□ -0.09
USF1-211ENST00000534633 KCNQ1P51787 676 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 COL9A3Q14050 684 aaPredicted RBP14.51□□□□□ -0.09
USF1-211ENST00000534633 SLC35G1Q2M3R5 365 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 TRAF7Q6Q0C0 670 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 SPRED2Q7Z698 418 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 RALYLQ86SE5 291 aaKnown RBP14.51□□□□□ -0.09
USF1-211ENST00000534633 WNT8BQ93098 351 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 RAD9AQ99638 391 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 C16orf70Q9BSU1 422 aa14.51□□□□□ -0.09
USF1-211ENST00000534633 FRMPD4Q14CM0 1322 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 PNMA6FA0A0J9YX94 578 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 CYTH3O43739 400 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 LPXNO60711 386 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 STAM2O75886 525 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 ZNF200P98182 395 aaPredicted RBP14.5□□□□□ -0.09
USF1-211ENST00000534633 SP2Q02086 613 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 TROAPQ12815 778 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 MBTPS1Q14703 1052 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 WTAPQ15007 396 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 SART3Q15020 963 aaKnown RBP14.5□□□□□ -0.09
USF1-211ENST00000534633 TCTN1Q2MV58 587 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 GNPTABQ3T906 1256 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 TMCO2Q7Z6W1 182 aaPredicted RBP14.5□□□□□ -0.09
USF1-211ENST00000534633 SERINC5Q86VE9 423 aa14.5□□□□□ -0.09
USF1-211ENST00000534633 FCHSD1Q86WN1 690 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms