RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 C16orf70Q9BSU1 422 aa11.94□□□□□ -0.5
CLP1-206ENST00000533905 CD320Q9NPF0 282 aa11.94□□□□□ -0.5
CLP1-206ENST00000533905 MRVI1Q9Y6F6 885 aa11.94□□□□□ -0.5
CLP1-206ENST00000533905 TRIP12Q14669 1992 aaPredicted RBP11.94□□□□□ -0.5
CLP1-206ENST00000533905 MYO9BQ13459 2157 aa11.94□□□□□ -0.5
CLP1-206ENST00000533905 hCG_1642624A0A1W2PR95 340 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 E7EWF7 191 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 ZBTB5O15062 677 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 GGPS1O95749 300 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 CXCL10P02778 98 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 SUPT20HL2P0C7V6 817 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 RXRAP19793 462 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 CHMLP26374 656 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 RBL2Q08999 1139 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 TROAPQ12815 778 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 STXBP2Q15833 593 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 CENPQQ7L2Z9 268 aaPredicted RBP11.93□□□□□ -0.5
CLP1-206ENST00000533905 FCHSD1Q86WN1 690 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 CMTR1Q8N1G2 835 aaKnown RBP11.93□□□□□ -0.5
CLP1-206ENST00000533905 ATXN2LQ8WWM7 1075 aaKnown RBP11.93□□□□□ -0.5
CLP1-206ENST00000533905 EMID1Q96A84 441 aaPredicted RBP11.93□□□□□ -0.5
CLP1-206ENST00000533905 PCDHA1Q9Y5I3 950 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 COL4A6Q14031 1691 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 MYO15AQ9UKN7 3530 aa11.93□□□□□ -0.5
CLP1-206ENST00000533905 SELPP16109 830 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 HOXC8P31273 242 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 PTPN11Q06124 597 aaPredicted RBP11.92□□□□□ -0.5
CLP1-206ENST00000533905 CELF3Q5SZQ8 465 aaKnown RBP11.92□□□□□ -0.5
CLP1-206ENST00000533905 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 MB21D2Q8IYB1 491 aaPredicted RBP11.92□□□□□ -0.5
CLP1-206ENST00000533905 PPTC7Q8NI37 304 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 SLC9A7Q96T83 725 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 C17orf80Q9BSJ5 609 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 UBAC1Q9BSL1 405 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 AMNQ9BXJ7 453 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 RIOX1Q9H6W3 641 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 NOD1Q9Y239 953 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 MRPL11Q9Y3B7 192 aaKnown RBP11.92□□□□□ -0.5
CLP1-206ENST00000533905 SIP14410 1827 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 BAZ2BQ9UIF8 2168 aaKnown RBP11.92□□□□□ -0.5
CLP1-206ENST00000533905 MYH6P13533 1939 aa11.92□□□□□ -0.5
CLP1-206ENST00000533905 FRMPD4Q14CM0 1322 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 RAD50Q92878 1312 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 LINC01553A4QN01 128 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 TREHO43280 583 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 TLL1O43897 1013 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 EIF3JO75822 258 aaKnown RBP11.91□□□□□ -0.5
CLP1-206ENST00000533905 PFKMP08237 780 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 CTSHP09668 335 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 COL9A1P20849 921 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 RFC2P35250 354 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 MRPS5P82675 430 aaKnown RBP11.91□□□□□ -0.5
CLP1-206ENST00000533905 USP17L6PQ6QN14 398 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 TICAM2Q86XR7 235 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 DHX37Q8IY37 1157 aaKnown RBP11.91□□□□□ -0.5
CLP1-206ENST00000533905 IGDCC4Q8TDY8 1250 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 AFAP1L1Q8TED9 768 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 SPATA33Q96N06 139 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 IWS1Q96ST2 819 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 SEZ6LQ9BYH1 1024 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 LRRC2Q9BYS8 371 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 MTIF3Q9H2K0 278 aaKnown RBP11.91□□□□□ -0.5
CLP1-206ENST00000533905 RTEL1Q9NZ71 1219 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 USP34Q70CQ2 3546 aa11.91□□□□□ -0.5
CLP1-206ENST00000533905 IFIT3O14879 490 aaKnown RBP11.9□□□□□ -0.5
CLP1-206ENST00000533905 ADAMTS3O15072 1205 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 SGSM2O43147 1006 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 LGALS2P05162 132 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 MFAP1P55081 439 aaKnown RBP11.9□□□□□ -0.5
CLP1-206ENST00000533905 SP4Q02446 784 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 BFSP2Q13515 415 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 SKIV2LQ15477 1246 aaKnown RBP11.9□□□□□ -0.5
CLP1-206ENST00000533905 DGKDQ16760 1214 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 RUFY4Q6ZNE9 571 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 C7orf31Q8N865 590 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 RETREG2Q8NC44 543 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 DBF4BQ8NFT6 615 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 KRT23Q9C075 422 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 EPHX3Q9H6B9 360 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 SUGCTQ9HAC7 445 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 LY9Q9HBG7 655 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 C11orf16Q9NQ32 467 aa11.9□□□□□ -0.5
CLP1-206ENST00000533905 ATG2AQ2TAZ0 1938 aa11.9□□□□□ -0.51
CLP1-206ENST00000533905 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.89□□□□□ -0.51
CLP1-206ENST00000533905 MEIS2O14770 477 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 KPNA6O60684 536 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 ATP9AO75110 1047 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 GJB5O95377 273 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 SMIM10L2AP0DMW4 78 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 SMIM10L2BP0DMW5 78 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 POU3F3P20264 500 aaPredicted RBP11.89□□□□□ -0.51
CLP1-206ENST00000533905 CASTP20810 708 aaKnown RBP11.89□□□□□ -0.51
CLP1-206ENST00000533905 PTK7Q13308 1070 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 UBE2SQ16763 222 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 CNKSR3Q6P9H4 555 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 CYFIP1Q7L576 1253 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 SERINC5Q86VE9 423 aa11.89□□□□□ -0.51
CLP1-206ENST00000533905 MCF2L2Q86YR7 1114 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms