RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 YME1L1Q96TA2 773 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 PXMP2Q9NR77 195 aa13.46□□□□□ -0.25
CMTM1-216ENST00000533078 SALL3Q9BXA9 1300 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 RSPH10B2B2RC85 870 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 PPFIA4O75335 1185 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 RSPH10BP0C881 870 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 MYCLP12524 364 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-216ENST00000533078 QRICH1Q2TAL8 776 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 ZNF589Q86UQ0 364 aaPredicted RBP13.45□□□□□ -0.26
CMTM1-216ENST00000533078 TBC1D10CQ8IV04 446 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 FAM178BQ8IXR5 827 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 SEPT8Q92599 483 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 MRPL38Q96DV4 380 aaKnown RBP13.45□□□□□ -0.26
CMTM1-216ENST00000533078 SPATA33Q96N06 139 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 UBAC1Q9BSL1 405 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 CPVLQ9H3G5 476 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 VAT1LQ9HCJ6 419 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
CMTM1-216ENST00000533078 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
CMTM1-216ENST00000533078 NEDD4P46934 1319 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-216ENST00000533078 C17orf102A2RUQ5 167 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 KDM4AO75164 1064 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 TGFB3P10600 412 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 GNAT1P11488 350 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 GPNMBQ14956 572 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 EP400NLQ6ZTU2 488 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 TBC1D5Q92609 795 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 ZSCAN10Q96SZ4 725 aaPredicted RBP13.44□□□□□ -0.26
CMTM1-216ENST00000533078 C17orf80Q9BSJ5 609 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 MLXIPQ9HAP2 919 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 COL20A1Q9P218 1284 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 MYH7BA7E2Y1 1941 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 MUC6Q6W4X9 2439 aa13.44□□□□□ -0.26
CMTM1-216ENST00000533078 HAS3O00219 553 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 NOP56O00567 594 aaKnown RBP13.43□□□□□ -0.26
CMTM1-216ENST00000533078 GGPS1O95749 300 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 CCND2P30279 289 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 IMMTQ16891 758 aaKnown RBP13.43□□□□□ -0.26
CMTM1-216ENST00000533078 GNPTABQ3T906 1256 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 CELF3Q5SZQ8 465 aaKnown RBP13.43□□□□□ -0.26
CMTM1-216ENST00000533078 MICAL3Q7RTP6 2002 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 SAMD3Q8N6K7 520 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 DBF4BQ8NFT6 615 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 ATP6V0A1Q93050 837 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 KRT23Q9C075 422 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 CNNM2Q9H8M5 875 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 DIAPH3Q9NSV4 1193 aa13.43□□□□□ -0.26
CMTM1-216ENST00000533078 HIP1O00291 1037 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 NCK2O43639 380 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 CAND2O75155 1236 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 HTRA4P83105 476 aaPredicted RBP13.42□□□□□ -0.26
CMTM1-216ENST00000533078 GPM6BQ13491 265 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 TRIM71Q2Q1W2 868 aaKnown RBP13.42□□□□□ -0.26
CMTM1-216ENST00000533078 EPC2Q52LR7 807 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 IFIT1BQ5T764 474 aaKnown RBP13.42□□□□□ -0.26
CMTM1-216ENST00000533078 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
CMTM1-216ENST00000533078 SERINC5Q86VE9 423 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 BANK1Q8NDB2 785 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.42□□□□□ -0.26
CMTM1-216ENST00000533078 ANKS1AQ92625 1134 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 APBB2Q92870 758 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 KHSRPQ92945 711 aaKnown RBP eCLIP13.42□□□□□ -0.26
CMTM1-216ENST00000533078 PDCD2LQ9BRP1 358 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 JMJD4Q9H9V9 463 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 C11orf16Q9NQ32 467 aa13.42□□□□□ -0.26
CMTM1-216ENST00000533078 WDFY4Q6ZS81 3184 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 GRXCR2A6NFK2 248 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 B4E1Z4 1266 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 H3BRB1 525 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 DCXO43602 365 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 SORBS3O60504 671 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 UPP2O95045 317 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 HOXD8P13378 290 aaPredicted RBP13.41□□□□□ -0.26
CMTM1-216ENST00000533078 IL9P15248 144 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 HSD17B4P51659 736 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 ZNF200P98182 395 aaPredicted RBP13.41□□□□□ -0.26
CMTM1-216ENST00000533078 HSDL1Q3SXM5 330 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 PLEKHG4Q58EX7 1191 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 ENAHQ8N8S7 591 aaPredicted RBP13.41□□□□□ -0.26
CMTM1-216ENST00000533078 PABPC5Q96DU9 382 aaKnown RBP13.41□□□□□ -0.26
CMTM1-216ENST00000533078 UPF3BQ9BZI7 483 aaKnown RBP13.41□□□□□ -0.26
CMTM1-216ENST00000533078 NSUN3Q9H649 340 aaKnown RBP13.41□□□□□ -0.26
CMTM1-216ENST00000533078 TUT1Q9H6E5 874 aaKnown RBP13.41□□□□□ -0.26
CMTM1-216ENST00000533078 PRKAG3Q9UGI9 489 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 ZNF215Q9UL58 517 aaPredicted RBP13.41□□□□□ -0.26
CMTM1-216ENST00000533078 RWDD3Q9Y3V2 267 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 PCDHA1Q9Y5I3 950 aa13.41□□□□□ -0.26
CMTM1-216ENST00000533078 H3BNC9 293 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 H3BQ06 376 aaPredicted RBP13.4□□□□□ -0.26
CMTM1-216ENST00000533078 GCOM1H8Y6P7 765 aaPredicted RBP13.4□□□□□ -0.26
CMTM1-216ENST00000533078 ZBTB5O15062 677 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 POLR2MP0CAP2 368 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 SDSP20132 328 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 NEDD9Q14511 834 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 MBTPS1Q14703 1052 aa13.4□□□□□ -0.26
CMTM1-216ENST00000533078 TCTN1Q2MV58 587 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms