RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 DYNC1LI2O43237 492 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 STX6O43752 255 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 FAM86B2P0C5J1 330 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 CYP3A7P24462 503 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 NEDD9Q14511 834 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 LY6KQ17RY6 165 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 PRR16Q569H4 304 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 EARS2Q5JPH6 523 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 MOXD1Q6UVY6 613 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 PLA2G4DQ86XP0 818 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 DHX37Q8IY37 1157 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 ARRDC4Q8NCT1 418 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 GIMAP8Q8ND71 665 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 U2AF1L4Q8WU68 220 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 SENP7Q9BQF6 1050 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 XPNPEP3Q9NQH7 507 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 KCNH7Q9NS40 1196 aa12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 NOL7Q9UMY1 257 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 GNEQ9Y223 722 aaKnown RBP12.77□□□□□ -0.37
TRAPPC4-211ENST00000533012 KIF28PB7ZC32 967 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 EDIL3O43854 480 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 CCNT1O60563 726 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 ARIH2O95376 493 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 GH1P01241 217 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 ARP10275 920 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 GCFC2P16383 781 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 ATP2B1P20020 1258 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 GJA8P48165 433 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 SETQ01105 290 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 LAMC2Q13753 1193 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 Q4G0T1 1027 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 TMEM63BQ5T3F8 832 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 PPP4R3AQ6IN85 833 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 RNF180Q86T96 592 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 CRISPLD2Q9H0B8 497 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 MLXIPQ9HAP2 919 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 DDX25Q9UHL0 483 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 OGDHLQ9ULD0 1010 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
TRAPPC4-211ENST00000533012 IGLV3-22A0A075B6J6 115 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 FAM205CA6NFA0 338 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 ADCY6O43306 1168 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 ATP9AO75110 1047 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 TDP2O95551 362 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 PGK1P00558 417 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 TRAPPC10P48553 1259 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 CENPFP49454 3210 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 GJA9P57773 515 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 SP2Q02086 613 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 CELF3Q5SZQ8 465 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 TLK2Q86UE8 772 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 OR6J1Q8NGC5 347 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 COPS5Q92905 334 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 LENG1Q96BZ8 264 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 SDF4Q9BRK5 362 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 ZNF577Q9BSK1 485 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 MTMR6Q9Y217 621 aa12.75□□□□□ -0.37
TRAPPC4-211ENST00000533012 RBBP6Q7Z6E9 1792 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 IPO5O00410 1097 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 ZEB2O60315 1214 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 MARCH6O60337 910 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 GGPS1O95749 300 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 C6orf222P0C671 652 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 UBA1P22314 1058 aaKnown RBP12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 CPT1AP50416 773 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 SEMA3FQ13275 785 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 RILPL1Q5EBL4 403 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 GNASQ5JWF2 1037 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 GJC2Q5T442 439 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 MYSM1Q5VVJ2 828 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 METTL7BQ6UX53 244 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 CYFIP1Q7L576 1253 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 BRAPQ7Z569 592 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 EMID1Q96A84 441 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 MBOAT7Q96N66 472 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 ZSCAN16Q9H4T2 348 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 TBC1D22BQ9NU19 505 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 PKD2L1Q9P0L9 805 aa12.74□□□□□ -0.37
TRAPPC4-211ENST00000533012 SYNRGQ9UMZ2 1314 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 LCTP09848 1927 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 MSH4O15457 936 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 SORBS3O60504 671 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 ADAMTS4O75173 837 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 BAG4O95429 457 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 KCNA2P16389 499 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 EN2P19622 333 aaPredicted RBP12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 NKX3-2P78367 333 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 ARHGAP1Q07960 439 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 FSCN1Q16658 493 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 TTC38Q5R3I4 469 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 ANKLE1Q8NAG6 615 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 PCSK9Q8NBP7 692 aaKnown RBP12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 KLHDC9Q8NEP7 349 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 LENG9Q96B70 501 aa12.73□□□□□ -0.37
TRAPPC4-211ENST00000533012 SPATA33Q96N06 139 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms