RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, human

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-209	ENST00000531474	TMEM260	Q9NX78	707 aa		10.71	□□□□□ -0.69
NXF1-209	ENST00000531474	FAM13B	Q9NYF5	915 aa		10.71	□□□□□ -0.69
NXF1-209	ENST00000531474	FLRT1	Q9NZU1	646 aa		10.71	□□□□□ -0.69
NXF1-209	ENST00000531474	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.71	□□□□□ -0.69
NXF1-209	ENST00000531474	PCDHA4	Q9UN74	947 aa		10.71	□□□□□ -0.69
NXF1-209	ENST00000531474	ASB14	A6NK59	587 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	ADAMTS3	O15072	1205 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	HMGCR	P04035	888 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	INHA	P05111	366 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	CYP2C19	P33261	490 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	SYK	P43405	635 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	UBXN2A	P68543	259 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	PDE4D	Q08499	809 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	TRIM32	Q13049	653 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	STX1A	Q16623	288 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	ARMCX2	Q7L311	632 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	TEX2	Q8IWB9	1127 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	CKAP2L	Q8IYA6	745 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	BLID	Q8IZY5	108 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	DNER	Q8NFT8	737 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	RASGRP4	Q8TDF6	673 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	FERMT2	Q96AC1	680 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	PYM1	Q9BRP8	204 aa	Known RBP	10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	TINF2	Q9BSI4	451 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	EHMT1	Q9H9B1	1298 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	PXMP2	Q9NR77	195 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	KIAA1468	Q9P260	1216 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	PCDHA6	Q9UN73	950 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	PCDHA8	Q9Y5H6	950 aa		10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	SRPRB	Q9Y5M8	271 aa	Known RBP	10.7	□□□□□ -0.7
NXF1-209	ENST00000531474	SYNGAP1	Q96PV0	1343 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474		A0A1B0GVL5	298 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	GOLGA6L6	A8MZA4	724 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	ESPN	B1AK53	854 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474		B4DLN1	442 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	GOLGA6L19	H0YKK7	550 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	MYC	P01106	439 aa	Predicted RBP	10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	PRKCSH	P14314	528 aa	Predicted RBP	10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	ZNF165	P49910	485 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	NDUFA8	P51970	172 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	AP3B2	Q13367	1082 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	RESP18	Q5W5W9	173 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	MAMDC4	Q6UXC1	1216 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	MSL3	Q8N5Y2	521 aa	Known RBP	10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	DAGLB	Q8NCG7	672 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	IL31RA	Q8NI17	732 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	ANO3	Q9BYT9	981 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	FTO	Q9C0B1	505 aa	Known RBP eCLIP	10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	GOLPH3L	Q9H4A5	285 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	USP25	Q9UHP3	1055 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	ZHX1	Q9UKY1	873 aa	Predicted RBP	10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	MRVI1	Q9Y6F6	885 aa		10.69	□□□□□ -0.7
NXF1-209	ENST00000531474	FRMPD4	Q14CM0	1322 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	RPTOR	Q8N122	1335 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	LOC102724159	A0A0B4J2E5	919 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	FOS	P01100	380 aa	Predicted RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	NR3C2	P08235	984 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	MYCL	P12524	364 aa	Predicted RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	PRKAR2A	P13861	404 aa	Known RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	MARCKS	P29966	332 aa	Predicted RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	CCND2	P30279	289 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	CLK2	P49760	499 aa	Known RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	VASP	P50552	380 aa	Predicted RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	CACNB2	Q08289	660 aa	Predicted RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	PGM5	Q15124	567 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	PWP2	Q15269	919 aa	Known RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	NPY5R	Q15761	445 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	ANO6	Q4KMQ2	910 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	MCTP2	Q6DN12	878 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	EEPD1	Q7L9B9	569 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	ZSCAN30	Q86W11	494 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	OXER1	Q8TDS5	423 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	IWS1	Q96ST2	819 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	PDCD2L	Q9BRP1	358 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	HPSE	Q9Y251	543 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	PCNT	O95613	3336 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	SMCHD1	A6NHR9	2005 aa		10.68	□□□□□ -0.7
NXF1-209	ENST00000531474	CCDC194	A0A1B0GVG4	234 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	SMTNL1	A8MU46	457 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	BECN2	A8MW95	431 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	SNAI1	O95863	264 aa	Predicted RBP	10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	IGHA2	P01877	340 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	PTMA	P06454	111 aa	Known RBP	10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	PFKFB1	P16118	471 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	EDNRB	P24530	442 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	MSN	P26038	577 aa	Known RBP	10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	TOB1	P50616	345 aa	Predicted RBP	10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	TPM4	P67936	248 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	NR5A1	Q13285	461 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	STXBP2	Q15833	593 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	PRAMEF19	Q5SWL8	479 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	KRT25	Q7Z3Z0	450 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	FBXO16	Q8IX29	292 aa	Predicted RBP	10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	CEP57L1	Q8IYX8	460 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	MORC4	Q8TE76	937 aa		10.67	□□□□□ -0.7
NXF1-209	ENST00000531474	ZFP91	Q96JP5	570 aa	Predicted RBP	10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms