RNA–Protein interactions for RNA: ENST00000530470.1

TRIM29-215, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 771 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-215ENST00000530470 SMARCC2Q8TAQ2 1214 aa13.58□□□□□ -0.24
TRIM29-215ENST00000530470 CUL5Q93034 780 aa13.58□□□□□ -0.24
TRIM29-215ENST00000530470 VWCEQ96DN2 955 aa13.58□□□□□ -0.24
TRIM29-215ENST00000530470 SPATA33Q96N06 139 aa13.58□□□□□ -0.24
TRIM29-215ENST00000530470 NEK1Q96PY6 1258 aa13.58□□□□□ -0.24
TRIM29-215ENST00000530470 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
TRIM29-215ENST00000530470 TANC1Q9C0D5 1861 aa13.58□□□□□ -0.24
TRIM29-215ENST00000530470 MYH7BA7E2Y1 1941 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 PIK3CDO00329 1044 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 PPFIA4O75335 1185 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 HOXD8P13378 290 aaPredicted RBP13.57□□□□□ -0.24
TRIM29-215ENST00000530470 MRPS9P82933 396 aaKnown RBP13.57□□□□□ -0.24
TRIM29-215ENST00000530470 BFSP2Q13515 415 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 MFSD10Q14728 455 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 GRIN2CQ14957 1233 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 HSDL1Q3SXM5 330 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 GNPTABQ3T906 1256 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 USP17L6PQ6QN14 398 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 SYNE3Q6ZMZ3 975 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 MICU3Q86XE3 530 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 CCDC155Q8N6L0 562 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 C7orf31Q8N865 590 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 FANCBQ8NB91 859 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.24
TRIM29-215ENST00000530470 CCDC136Q96JN2 1154 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 ALG1Q9BT22 464 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 ZNF576Q9H609 170 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 MLXIPQ9HAP2 919 aa13.57□□□□□ -0.24
TRIM29-215ENST00000530470 ZBBXA8MT70 800 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 HAS3O00219 553 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 MEIS2O14770 477 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 FOSL2P15408 326 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 RAB30Q15771 203 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 KIAA0753Q2KHM9 967 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 TMTC3Q6ZXV5 915 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 RASEFQ8IZ41 740 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 CCDC82Q8N4S0 544 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 MAFAQ8NHW3 353 aaPredicted RBP13.56□□□□□ -0.24
TRIM29-215ENST00000530470 CAGE1Q8TC20 777 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 INPP4AQ96PE3 977 aaPredicted RBP13.56□□□□□ -0.24
TRIM29-215ENST00000530470 CTAGE1Q96RT6 745 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 HDAC6Q9UBN7 1215 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 GTF2IRD1Q9UHL9 959 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 MSRAQ9UJ68 235 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 CDH23Q9H251 3354 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 SCN5AQ14524 2016 aa13.56□□□□□ -0.24
TRIM29-215ENST00000530470 hCG_1642624A0A1W2PR95 340 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 SPATA31C2B4DYI2 1134 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 HAX1O00165 279 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 FIBPO43427 364 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 ACTN1P12814 892 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 ICAM3P32942 547 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 EXOSC10Q01780 885 aaKnown RBP13.55□□□□□ -0.24
TRIM29-215ENST00000530470 KRT32Q14532 448 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 ADCK5Q3MIX3 580 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 TSGA10IPQ3SY00 556 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 PCNX4Q63HM2 1172 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 XRRA1Q6P2D8 792 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 APOA5Q6Q788 366 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 DHX32Q7L7V1 743 aaKnown RBP13.55□□□□□ -0.24
TRIM29-215ENST00000530470 AFAP1L1Q8TED9 768 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 PSTPIP2Q9H939 334 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 RTEL1Q9NZ71 1219 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 GBF1Q92538 1859 aa13.55□□□□□ -0.24
TRIM29-215ENST00000530470 SEMA3FQ13275 785 aa13.54□□□□□ -0.24
TRIM29-215ENST00000530470 NEDD9Q14511 834 aa13.54□□□□□ -0.24
TRIM29-215ENST00000530470 LRRC8DQ7L1W4 858 aa13.54□□□□□ -0.24
TRIM29-215ENST00000530470 HEATR3Q7Z4Q2 680 aa13.54□□□□□ -0.24
TRIM29-215ENST00000530470 DHX38Q92620 1227 aaKnown RBP13.54□□□□□ -0.24
TRIM29-215ENST00000530470 C16orf70Q9BSU1 422 aa13.54□□□□□ -0.24
TRIM29-215ENST00000530470 FTOQ9C0B1 505 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRIM29-215ENST00000530470 NKX2-4Q9H2Z4 354 aa13.54□□□□□ -0.24
TRIM29-215ENST00000530470 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
TRIM29-215ENST00000530470 RBM28Q9NW13 759 aaKnown RBP13.54□□□□□ -0.24
TRIM29-215ENST00000530470 YBX2Q9Y2T7 364 aaKnown RBP13.54□□□□□ -0.24
TRIM29-215ENST00000530470 EYSQ5T1H1 3165 aa13.54□□□□□ -0.24
TRIM29-215ENST00000530470 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
TRIM29-215ENST00000530470 ZBTB43O43298 467 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 HMGB1P09429 215 aaKnown RBP13.53□□□□□ -0.24
TRIM29-215ENST00000530470 CKBP12277 381 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 SELPP16109 830 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
TRIM29-215ENST00000530470 RABGGTBP53611 331 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 RBL2Q08999 1139 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 PTK7Q13308 1070 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 UBE2SQ16763 222 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 RTN1Q16799 776 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 METTL7BQ6UX53 244 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 NLRX1Q86UT6 975 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM29-215ENST00000530470 SLC28A3Q9HAS3 691 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 BRPF3Q9ULD4 1205 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 CNTNAP5Q8WYK1 1306 aa13.53□□□□□ -0.24
TRIM29-215ENST00000530470 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
TRIM29-215ENST00000530470 H3BRB1 525 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms