RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 F2P00734 622 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 IQCF3P0C7M6 154 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 CASTP20810 708 aaKnown RBP13.92□□□□□ -0.18
SSBP3-210ENST00000525990 KIF5BP33176 963 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 LAMC2Q13753 1193 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 MFSD10Q14728 455 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 GPNMBQ14956 572 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 DGKDQ16760 1214 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 UBE2SQ16763 222 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 MAFAQ8NHW3 353 aaPredicted RBP13.92□□□□□ -0.18
SSBP3-210ENST00000525990 SPATA33Q96N06 139 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 MTA3Q9BTC8 594 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 NKX2-4Q9H2Z4 354 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 BRPF3Q9ULD4 1205 aa13.92□□□□□ -0.18
SSBP3-210ENST00000525990 CNTNAP5Q8WYK1 1306 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 UNC80Q8N2C7 3258 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 HOXD8P13378 290 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-210ENST00000525990 FOSL2P15408 326 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 PTPN11Q06124 597 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-210ENST00000525990 KIAA0753Q2KHM9 967 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 TCTN1Q2MV58 587 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 APOA5Q6Q788 366 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 TMTC3Q6ZXV5 915 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 SESTD1Q86VW0 696 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 SAMD3Q8N6K7 520 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 USP38Q8NB14 1042 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 INPP4AQ96PE3 977 aaPredicted RBP13.91□□□□□ -0.18
SSBP3-210ENST00000525990 NEK1Q96PY6 1258 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 SEC63Q9UGP8 760 aaKnown RBP13.91□□□□□ -0.18
SSBP3-210ENST00000525990 GTF2IRD1Q9UHL9 959 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 NOD1Q9Y239 953 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 SLC12A7Q9Y666 1083 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 MICAL3Q7RTP6 2002 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 KAT6AQ92794 2004 aa13.91□□□□□ -0.18
SSBP3-210ENST00000525990 TMEM265A0A087WTH1 108 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 EXOSC10Q01780 885 aaKnown RBP13.9□□□□□ -0.18
SSBP3-210ENST00000525990 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 SGMS1Q86VZ5 419 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 TRIM50Q86XT4 487 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 FANCBQ8NB91 859 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 C16orf70Q9BSU1 422 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 PRDM12Q9H4Q4 367 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
SSBP3-210ENST00000525990 CHD9Q3L8U1 2897 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 SPATA31C2B4DYI2 1134 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 DLL1O00548 723 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 ARHGEF15O94989 841 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 SMARCA1P28370 1054 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 SP4Q02446 784 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 TRAF1Q13077 416 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 CYFIP1Q7L576 1253 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 TMCO2Q7Z6W1 182 aaPredicted RBP13.89□□□□□ -0.19
SSBP3-210ENST00000525990 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.89□□□□□ -0.192e-6■■■□□ 17
SSBP3-210ENST00000525990 RPUSD2Q8IZ73 545 aaKnown RBP13.89□□□□□ -0.19
SSBP3-210ENST00000525990 TMTC2Q8N394 836 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 C7orf31Q8N865 590 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 RETREG2Q8NC44 543 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 CCDC136Q96JN2 1154 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 PGBD1Q96JS3 809 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 SLC4A7Q9Y6M7 1214 aa13.89□□□□□ -0.19
SSBP3-210ENST00000525990 PIK3CDO00329 1044 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 NBNO60934 754 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 LGALS2P05162 132 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 CALM1P0DP23 149 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 CALM2P0DP24 149 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 CALM3P0DP25 149 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 TGFB3P10600 412 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 CKBP12277 381 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 ATP2A2P16615 1042 aaKnown RBP13.88□□□□□ -0.19
SSBP3-210ENST00000525990 CDC27P30260 824 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 ICAM3P32942 547 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 GNAQP50148 359 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 FUT2Q10981 343 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 BFSP2Q13515 415 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 ADGRE1Q14246 886 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 TRIM71Q2Q1W2 868 aaKnown RBP13.88□□□□□ -0.19
SSBP3-210ENST00000525990 RNF20Q5VTR2 975 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 PCNX4Q63HM2 1172 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 WWC2Q6AWC2 1192 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 TRAF7Q6Q0C0 670 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 SPRED2Q7Z698 418 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 OSBPL7Q9BZF2 842 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■□□□ 11.8
SSBP3-210ENST00000525990 MTIF3Q9H2K0 278 aaKnown RBP13.88□□□□□ -0.19
SSBP3-210ENST00000525990 FAM217BQ9NTX9 383 aaPredicted RBP13.88□□□□□ -0.19
SSBP3-210ENST00000525990 PKD2L1Q9P0L9 805 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 WDR81Q562E7 1941 aa13.88□□□□□ -0.19
SSBP3-210ENST00000525990 KLF18A0A0U1RQI7 1052 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 FIBPO43427 364 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 ATP9AO75110 1047 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 PPFIA4O75335 1185 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 PFKMP08237 780 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 MBTPS1Q14703 1052 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 TSGA10IPQ3SY00 556 aa13.87□□□□□ -0.19
SSBP3-210ENST00000525990 ZNF618Q5T7W0 954 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms