RNA–Protein interactions for RNA: ENST00000524650.1

SOX6-204, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-204ENST00000524650 SMARCC2Q8TAQ2 1214 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 IGDCC4Q8TDY8 1250 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 CUL5Q93034 780 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 MTMR8Q96EF0 704 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 PDCD2LQ9BRP1 358 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 LRRC2Q9BYS8 371 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 RIOX1Q9H6W3 641 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 LY9Q9HBG7 655 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 RTEL1Q9NZ71 1219 aa7.48□□□□□ -1.21
SOX6-204ENST00000524650 YBX2Q9Y2T7 364 aaKnown RBP7.48□□□□□ -1.21
SOX6-204ENST00000524650 hCG_1642624A0A1W2PR95 340 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 PITPNM1O00562 1244 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 SLC27A2O14975 620 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 DDAH1O94760 285 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 PFKMP08237 780 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 RFC2P35250 354 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 GNPTABQ3T906 1256 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 CELF3Q5SZQ8 465 aaKnown RBP7.47□□□□□ -1.21
SOX6-204ENST00000524650 MYSM1Q5VVJ2 828 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 CREB3L3Q68CJ9 461 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 KCNV1Q6PIU1 500 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 SYNE3Q6ZMZ3 975 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 VSIG10LQ86VR7 867 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 BBXQ8WY36 941 aaPredicted RBP7.47□□□□□ -1.21
SOX6-204ENST00000524650 KAT2BQ92831 832 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 GPKOWQ92917 476 aaPredicted RBP eCLIP7.47□□□□□ -1.21
SOX6-204ENST00000524650 ESYT1Q9BSJ8 1104 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 ZBED2Q9BTP6 218 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 KATNAL1Q9BW62 490 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 COL25A1Q9BXS0 654 aaPredicted RBP7.47□□□□□ -1.21
SOX6-204ENST00000524650 CERS4Q9HA82 394 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 MAP3K20Q9NYL2 800 aaKnown RBP7.47□□□□□ -1.21
SOX6-204ENST00000524650 HDAC6Q9UBN7 1215 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 NAP1L2Q9ULW6 460 aaPredicted RBP7.47□□□□□ -1.21
SOX6-204ENST00000524650 SLC12A7Q9Y666 1083 aa7.47□□□□□ -1.21
SOX6-204ENST00000524650 SPTBN5Q9NRC6 3674 aaKnown RBP7.47□□□□□ -1.21
SOX6-204ENST00000524650 XIRP2A4UGR9 3374 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 KIF28PB7ZC32 967 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 SH2B2O14492 632 aaPredicted RBP7.46□□□□□ -1.22
SOX6-204ENST00000524650 PPFIA4O75335 1185 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 RGS20O76081 388 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 PLEKHA8P1O95397 391 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 CA3P07451 260 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 CALM1P0DP23 149 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 CALM2P0DP24 149 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 CALM3P0DP25 149 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 TGFB3P10600 412 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 SELPP16109 830 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 UBA1P22314 1058 aaKnown RBP7.46□□□□□ -1.22
SOX6-204ENST00000524650 KCNJ6P48051 423 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 GNAQP50148 359 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 ZNF200P98182 395 aaPredicted RBP7.46□□□□□ -1.22
SOX6-204ENST00000524650 SP2Q02086 613 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 SKIV2LQ15477 1246 aaKnown RBP7.46□□□□□ -1.22
SOX6-204ENST00000524650 HSDL1Q3SXM5 330 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 RNF20Q5VTR2 975 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 USP17L6PQ6QN14 398 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 LRRC8DQ7L1W4 858 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 CYFIP1Q7L576 1253 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 HEATR3Q7Z4Q2 680 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 MICU3Q86XE3 530 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 TMTC2Q8N394 836 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 SAMD3Q8N6K7 520 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 USP38Q8NB14 1042 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 CAGE1Q8TC20 777 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 AFAP1L1Q8TED9 768 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 EMID1Q96A84 441 aaPredicted RBP7.46□□□□□ -1.22
SOX6-204ENST00000524650 TMEM87BQ96K49 555 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 LZTS2Q9BRK4 669 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 SPZ1Q9BXG8 430 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 LSG1Q9H089 658 aaKnown RBP7.46□□□□□ -1.22
SOX6-204ENST00000524650 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 PCDHA11Q9Y5I1 949 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 TTC28Q96AY4 2481 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 SCN10AQ9Y5Y9 1956 aa7.46□□□□□ -1.22
SOX6-204ENST00000524650 TRANK1O15050 2925 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 KIAA1217Q5T5P2 1943 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 H3BRB1 525 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 RBAK-RBAKDNI3L0D1 243 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 TLL1O43897 1013 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 F2P00734 622 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 CKBP12277 381 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 THPOP40225 353 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 MRPS9P82933 396 aaKnown RBP7.45□□□□□ -1.22
SOX6-204ENST00000524650 FGD1P98174 961 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 GHRHRQ02643 423 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 COL9A3Q14050 684 aaPredicted RBP7.45□□□□□ -1.22
SOX6-204ENST00000524650 ADGRE1Q14246 886 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 NEDD9Q14511 834 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 UTP14CQ5TAP6 766 aaKnown RBP7.45□□□□□ -1.22
SOX6-204ENST00000524650 FAM117BQ6P1L5 589 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 CENPQQ7L2Z9 268 aaPredicted RBP7.45□□□□□ -1.22
SOX6-204ENST00000524650 TMCO2Q7Z6W1 182 aaPredicted RBP7.45□□□□□ -1.22
SOX6-204ENST00000524650 SESTD1Q86VW0 696 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 HERC6Q8IVU3 1022 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 SRBD1Q8N5C6 995 aaKnown RBP7.45□□□□□ -1.22
SOX6-204ENST00000524650 IL27Q8NEV9 243 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 ARNTL2Q8WYA1 636 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 ATP6V0A1Q93050 837 aa7.45□□□□□ -1.22
SOX6-204ENST00000524650 VWCEQ96DN2 955 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms